Pairwise fitting emdb-1311 on emdb-1217 by gmfit



Pairwise fitting of target emdb-1311 on reference emdb-1217 by gmfit(PID:1226211).

RANK[1] Corr.Coeff:0.782 [JSmol] [Molmil]
TARGET(emdb-1311)
display:
color:
Cryo-EM visualization of transfer messenger RNA with two SmpBs in a stalled ribosome. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1311)]
REFERENCE(emdb-1217)
display:
color:
Signal recognition particle receptor exposes the ribosomal translocon binding site. [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.782 0.711 0.706 0.703 0.702 0.677 0.669 0.663 0.661 0.654

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_1217.map.gz", and read it.
  2. Download the Target map "emd_1311.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.035327,0.114373,0.992810 179.527526 center 0,0,0 model #1
    move 5.925369,5.159773,-9.810373 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!