Pairwise fitting emdb-1252 on pdb-6b2z by gmfit










Pairwise fitting of target emdb-1252 on reference pdb-6b2z by gmfit(PID:3994496).





RANK[1] Corr.Coeff:0.609

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1252)

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Nucleotide-dependent conformational changes in the DnaA-like core of the origin recognition complex. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1252)]







REFERENCE(pdb-6b2z)

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b'CRYO-EM STRUCTURE OF THE DIMERIC FO REGION OF YEAST MITOCHONDRIAL ATP ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.609
0.564
0.554
0.542
0.508
0.507
0.473
0.443
0.366
0.361







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "6b2z"(PDB-format) or 
 "6b2z"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1252.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.603541,0.090656,-0.792161 161.401004 center 0,0,0 model #1
move 307.873474,417.132426,272.141718 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!