Pairwise fitting emdb-1252 on pdb-5wel by gmfit










Pairwise fitting of target emdb-1252 on reference pdb-5wel by gmfit(PID:2411954).





RANK[1] Corr.Coeff:0.568

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1252)

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Nucleotide-dependent conformational changes in the DnaA-like core of the origin recognition complex. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1252)]







REFERENCE(pdb-5wel)

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color:


b'GLUA2 BOUND TO ANTAGONIST ZK AND GSG1L IN DIGITONIN, STATE 2          ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.568
0.549
0.540
0.537
0.492
0.488
0.486
0.457
0.444
0.443







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "5wel"(PDB-format) or 
 "5wel"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1252.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.087308,-0.631532,-0.770419 144.557858 center 0,0,0 model #1
move 312.785855,111.134791,-86.877559 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!