Pairwise fitting emdb-1252 on pdb-5u0a by gmfit










Pairwise fitting of target emdb-1252 on reference pdb-5u0a by gmfit(PID:2310267).





RANK[1] Corr.Coeff:0.677

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1252)

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Nucleotide-dependent conformational changes in the DnaA-like core of the origin recognition complex. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1252)]







REFERENCE(pdb-5u0a)

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b'CRISPR RNA-GUIDED SURVEILLANCE COMPLEX                                ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.677
0.626
0.607
0.603
0.599
0.570
0.536
0.514
0.483
0.450







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "5u0a"(PDB-format) or 
 "5u0a"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1252.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.638615,-0.708497,-0.300337 162.323104 center 0,0,0 model #1
move -327.270287,-100.359294,151.979914 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!