Pairwise fitting emdb-1252 on emdb-8534 by gmfit










Pairwise fitting of target emdb-1252 on reference emdb-8534 by gmfit(PID:612915).





RANK[1] Corr.Coeff:0.610

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1252)

display:



color:



Nucleotide-dependent conformational changes in the DnaA-like core of the origin recognition complex. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1252)]







REFERENCE(emdb-8534)

display:



color:


MalE-x-MalFGK2 Maltose (open conformation) [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.610
0.550
0.547
0.532
0.502
0.487
0.462
0.424
0.413
0.342







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_8534.map.gz", and read it.

  2.  Download the Target map "emd_1252.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.732149,-0.464094,0.498573 162.360219 center 0,0,0 model #1
move 174.404568,132.895821,447.687353 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!