Pairwise fitting emdb-1252 on emdb-8526 by gmfit










Pairwise fitting of target emdb-1252 on reference emdb-8526 by gmfit(PID:4118414).





RANK[1] Corr.Coeff:0.635

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1252)

display:



color:



Nucleotide-dependent conformational changes in the DnaA-like core of the origin recognition complex. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1252)]







REFERENCE(emdb-8526)

display:



color:


MalFGK2 ADP-VO4 [Ngauss:20]



[Download the reference map]





Other Transformations
rank
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Corr.Coeff.
0.635
0.574
0.546
0.530
0.495
0.475
0.471
0.454
0.423
0.423







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_8526.map.gz", and read it.

  2.  Download the Target map "emd_1252.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.759446,-0.454177,0.465795 160.951035 center 0,0,0 model #1
move 155.628059,121.677567,449.207719 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 8526)]

[Download the target GMM(emdb 1252)]

[Download gmfit result file(4118414)]