Pairwise fitting emdb-1252 on emdb-8014 by gmfit










Pairwise fitting of target emdb-1252 on reference emdb-8014 by gmfit(PID:4097685).





RANK[1] Corr.Coeff:0.725

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1252)

display:



color:



Nucleotide-dependent conformational changes in the DnaA-like core of the origin recognition complex. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1252)]







REFERENCE(emdb-8014)

display:



color:


Body region of the U4/U6.U5 tri-snRNP [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.725
0.652
0.646
0.622
0.619
0.612
0.599
0.596
0.572
0.570







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_8014.map.gz", and read it.

  2.  Download the Target map "emd_1252.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.567256,-0.570926,0.593518 149.694089 center 0,0,0 model #1
move 448.435842,533.835857,242.340253 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!