Pairwise fitting emdb-1252 on emdb-5389 by gmfit










Pairwise fitting of target emdb-1252 on reference emdb-5389 by gmfit(PID:1093475).





RANK[1] Corr.Coeff:0.617

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1252)

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Nucleotide-dependent conformational changes in the DnaA-like core of the origin recognition complex. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1252)]







REFERENCE(emdb-5389)

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An RNA Degradation Machine Sculpted by Ro Autoantigen and Noncoding RNA [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.617
0.549
0.529
0.527
0.484
0.473
0.442
0.427
0.420
0.419







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5389.map.gz", and read it.

  2.  Download the Target map "emd_1252.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.039942,0.142313,-0.989015 88.355615 center 0,0,0 model #1
move -43.295542,352.621088,24.860144 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!