Pairwise fitting emdb-1183 on emdb-3129 by gmfit










Pairwise fitting of target emdb-1183 on reference emdb-3129 by gmfit(PID:3971154).





RANK[1] Corr.Coeff:0.899

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1183)

display:



color:



Structural and functional insights into the interaction of echoviruses and decay-accelerating factor. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1183)]







REFERENCE(emdb-3129)

display:



color:


Structure-based energetics of protein interfaces guide FMDV vaccine design [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.899
0.887
0.886
0.879
0.876
0.875
0.875
0.875
0.874
0.872







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_3129.map.gz", and read it.

  2.  Download the Target map "emd_1183.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.247778,-0.415240,0.875318 100.961421 center 0,0,0 model #1
move 1.110578,-0.721731,-0.076951 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!