Pairwise fitting emdb-1157 on pdb-5h0s by gmfit










Pairwise fitting of target emdb-1157 on reference pdb-5h0s by gmfit(PID:1252628).





RANK[1] Corr.Coeff:0.611

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1157)

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ATPase-dependent cooperative binding of ORC and Cdc6 to origin DNA. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1157)]







REFERENCE(pdb-5h0s)

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b'EM STRUCTURE OF VP1A AND VP1B                                         ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.611
0.599
0.579
0.569
0.568
0.567
0.507
0.501
0.364
0.342







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "5h0s"(PDB-format) or 
 "5h0s"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1157.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.887905,-0.427769,0.169226 55.128594 center 0,0,0 model #1
move -691.553861,-670.429928,-324.733142 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!