Pairwise fitting emdb-1157 on pdb-4av2 by gmfit



Pairwise fitting of target emdb-1157 on reference pdb-4av2 by gmfit(PID:1379938).

RANK[1] Corr.Coeff:0.561 [JSmol] [Molmil]
TARGET(emdb-1157)
display:
color:
ATPase-dependent cooperative binding of ORC and Cdc6 to origin DNA. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1157)]
REFERENCE(pdb-4av2)
display:
color:
b'SINGLE PARTICLE ELECTRON MICROSCOPY OF PILQ DODECAMERIC COMPLEXES FROM' [Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.561 0.556 0.550 0.550 0.547 0.537 0.516 0.496 0.418 0.414

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "4av2"(PDB-format) or "4av2"(mmCIF-format), and read it.
  2. Download the Target map "emd_1157.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.121952,-0.963633,-0.237778 178.723936 center 0,0,0 model #1
    move 85.129409,-183.877968,47.857268 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!