Pairwise fitting emdb-1090 on emdb-8621 by gmfit










Pairwise fitting of target emdb-1090 on reference emdb-8621 by gmfit(PID:2485022).





RANK[1] Corr.Coeff:0.710

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1090)

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Cryo-EM visualization of a viral internal ribosome entry site bound to human ribosomes: the IRES functions as an RNA-based translation factor. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1090)]







REFERENCE(emdb-8621)

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The cryo-EM structure of YjeQ bound to the 30S subunit suggests a fidelity checkpoint function for this protein in ribosome assembly [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.710
0.666
0.584
0.544
0.533
0.513
0.512
0.471
0.361
0.357







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_8621.map.gz", and read it.

  2.  Download the Target map "emd_1090.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.401824,-0.112690,0.908757 179.900761 center 0,0,0 model #1
move 111.946998,183.399250,183.016793 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!