Pairwise fitting emdb-1090 on emdb-6710 by gmfit



Pairwise fitting of target emdb-1090 on reference emdb-6710 by gmfit(PID:2151058).

RANK[1] Corr.Coeff:0.714 [JSmol] [Molmil]
TARGET(emdb-1090)
display:
color:
Cryo-EM visualization of a viral internal ribosome entry site bound to human ribosomes: the IRES functions as an RNA-based translation factor. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1090)]
REFERENCE(emdb-6710)
display:
color:
Structure of the 30S small subunit of chloroplast ribosome from spinach [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.714 0.602 0.594 0.546 0.533 0.523 0.493 0.493 0.482 0.377

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_6710.map.gz", and read it.
  2. Download the Target map "emd_1090.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.601888,0.798550,-0.006888 177.108100 center 0,0,0 model #1
    move 203.562402,192.136962,211.006164 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!