Pairwise fitting emdb-1090 on emdb-5581 by gmfit



Pairwise fitting of target emdb-1090 on reference emdb-5581 by gmfit(PID:1293595).

RANK[1] Corr.Coeff:0.536 [JSmol] [Molmil]
TARGET(emdb-1090)
display:
color:
Cryo-EM visualization of a viral internal ribosome entry site bound to human ribosomes: the IRES functions as an RNA-based translation factor. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1090)]
REFERENCE(emdb-5581)
display:
color:
Negatively Stained TEM structure of trypanosomatid core editing complex (L-complex) [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.536 0.523 0.470 0.442 0.439 0.410 0.385 0.374 0.274 0.258

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_5581.map.gz", and read it.
  2. Download the Target map "emd_1090.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.251297,0.549993,-0.796466 52.615638 center 0,0,0 model #1
    move 111.858503,86.428400,46.768069 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!