Pairwise fitting emdb-1090 on emdb-2453 by gmfit



Pairwise fitting of target emdb-1090 on reference emdb-2453 by gmfit(PID:1506095).

RANK[1] Corr.Coeff:0.639 [JSmol] [Molmil]
TARGET(emdb-1090)
display:
color:
Cryo-EM visualization of a viral internal ribosome entry site bound to human ribosomes: the IRES functions as an RNA-based translation factor. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1090)]
REFERENCE(emdb-2453)
display:
color:
30S Ribosome Subunit Assembly Intermediates, Intermediate Group 4a [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.639 0.577 0.574 0.568 0.554 0.539 0.515 0.513 0.450 0.349

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_2453.map.gz", and read it.
  2. Download the Target map "emd_1090.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.226609,0.464086,0.856313 126.371753 center 0,0,0 model #1
    move 6.233799,12.063933,-51.889759 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!