Pairwise fitting emdb-1022 on pdb-5wc0 by gmfit



Pairwise fitting of target emdb-1022 on reference pdb-5wc0 by gmfit(PID:1673528).

RANK[1] Corr.Coeff:0.732 [JSmol] [Molmil]
TARGET(emdb-1022)
display:
color:
Three-dimensional reconstructions from cryoelectron microscopy images reveal an intimate complex between helicase DnaB and its loading partner DnaC. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1022)]
REFERENCE(pdb-5wc0)
display:
color:
b'KATANIN HEXAMER IN SPIRAL CONFORMATION ' [Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.732 0.709 0.701 0.694 0.685 0.682 0.674 0.668 0.389 0.378

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "5wc0"(PDB-format) or "5wc0"(mmCIF-format), and read it.
  2. Download the Target map "emd_1022.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.218672,-0.003368,0.975793 135.307741 center 0,0,0 model #1
    move 344.984140,181.560947,172.735888 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!