Pairwise fitting PDB-2rec on EMD-1022 by gmfit



Pairwise fitting of target PDB-2rec on reference EMD-1022 by gmfit(PID:18825).

RANK[1] Corr.Coeff:0.765 [JSmol] [Jmol_S] [Molmil]
TARGET(PDB-2rec)
RECA HEXAMER MODEL, ELECTRON MICROSCOPY [Ngauss:20]
[Download superimposed target atoms (PDB)(PDB-2rec)]
REFERENCE(EMD-1022)
Three-dimensional reconstructions from cryoelectron microscopy images reveal an intimate complex between helicase DnaB and its loading partner DnaC. [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.765 0.764 0.763 0.762 0.754 0.752 0.752 0.752 0.751 0.749

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_1022.map.gz", and read it.
  2. Download the Target molecule "2rec"(PDB-format) or "2rec"(mmCIF-format), and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.884465,-0.466569,0.005947 177.697296 center 0,0,0 model #1
    move 94.538535,90.945995,70.977987 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!