Pairwise fitting EMD-2190 on EMD-2189 by gmfit










Pairwise fitting of target EMD-2190 on reference EMD-2189 by gmfit(PID:1245754).





RANK[1] Corr.Coeff:0.978

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(EMD-2190)

display:



color:



human RNA polymerase II in complex with AluRA RNA [Ngauss:20]

[Download superimposed target map (CCP4) (EMD-2190)]







REFERENCE(EMD-2189)

display:



color:


human RNA polymerase II in complex with Alu RNA [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.978
0.713
0.713
0.693
0.684
0.673
0.671
0.665
0.665
0.665







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2189.map.gz", and read it.

  2.  Download the Target map "emd_2190.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.662104,0.739915,-0.118931 1.603311 center 0,0,0 model #1
move -4.838501,-2.510374,7.503446 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!