Pairwise fitting EMD-2190 on EMD-2189 by gmfit



Pairwise fitting of target EMD-2190 on reference EMD-2189 by gmfit(PID:6079).

RANK[1] Corr.Coeff:0.978 [JSmol] [Jmol_S] [Molmil]
TARGET(EMD-2190)
human RNA polymerase II in complex with AluRA RNA [Ngauss:20]
[Download superimposed target map (CCP4) (EMD-2190)]
REFERENCE(EMD-2189)
human RNA polymerase II in complex with Alu RNA [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.978 0.857 0.730 0.673 0.665 0.665 0.665 0.660 0.657 0.654

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_2189.map.gz", and read it.
  2. Download the Target map "emd_2190.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.662104,0.739915,-0.118931 1.603311 center 0,0,0 model #1
    move -4.838501,-2.510374,7.503446 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!