Pairwise fitting emdb-1090 on emdb-2470 by gmfit










Pairwise fitting of target emdb-1090 on reference emdb-2470 by gmfit(PID:3027115).





RANK[4] Corr.Coeff:0.542

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1090)

display:



color:



Cryo-EM visualization of a viral internal ribosome entry site bound to human ribosomes: the IRES functions as an RNA-based translation factor. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1090)]







REFERENCE(emdb-2470)

display:



color:


30S Ribosome Subunit Assembly Intermediates, Intermediate Group 4f [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.640
0.565
0.548
0.542
0.508
0.507
0.470
0.468
0.441
0.441







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2470.map.gz", and read it.

  2.  Download the Target map "emd_1090.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.836497,-0.501505,-0.220828 131.018942 center 0,0,0 model #1
move -0.643416,17.178560,60.964680 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!