Pairwise fitting emdb-1311 on emdb-1217 by gmfit










Pairwise fitting of target emdb-1311 on reference emdb-1217 by gmfit(PID:1226211).





RANK[10] Corr.Coeff:0.654

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1311)

display:



color:



Cryo-EM visualization of transfer messenger RNA with two SmpBs in a stalled ribosome. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1311)]







REFERENCE(emdb-1217)

display:



color:


Signal recognition particle receptor exposes the ribosomal translocon binding site. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.782
0.711
0.706
0.703
0.702
0.677
0.669
0.663
0.661
0.654







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1217.map.gz", and read it.

  2.  Download the Target map "emd_1311.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.845590,0.486426,-0.219927 82.634642 center 0,0,0 model #1
move -5.767664,3.508084,-0.171022 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!