Pairwise fitting emdb-1311 on emdb-4130 by gmfit










Pairwise fitting of target emdb-1311 on reference emdb-4130 by gmfit(PID:3066078).





RANK[3] Corr.Coeff:0.740

[JSmol]
[Molmil]


















TARGET(emdb-1311)




Cryo-EM visualization of transfer messenger RNA with two SmpBs in a stalled ribosome. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1311)]







REFERENCE(emdb-4130)



Structure of the mammalian ribosomal elongation complex with aminoacyl-tRNA, eEF1A, and didemnin B [Ngauss:20]



[Download the reference map]





Other Transformations
rank
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Corr.Coeff.
0.862
0.749
0.740
0.706
0.704
0.701
0.680
0.677
0.671
0.670







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_4130.map.gz", and read it.

  2.  Download the Target map "emd_1311.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.706771,-0.698832,-0.110043 139.563388 center 0,0,0 model #1
move 285.874632,289.078034,280.464269 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!