Pairwise fitting emdb-1833 on pdb-5lmv by gmfit










Pairwise fitting of target emdb-1833 on reference pdb-5lmv by gmfit(PID:189158).





RANK[4] Corr.Coeff:0.460

[JSmol]
[Molmil]


















TARGET(emdb-1833)




Drosophila melanogaster CMG complex - APO [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1833)]







REFERENCE(pdb-5lmv)



b'STRUCTURE OF BACTERIAL 30S-IF1-IF2-IF3-MRNA-TRNA TRANSLATION PRE-     ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
rank
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Corr.Coeff.
0.532
0.478
0.476
0.460
0.456
0.415
0.407
0.403
0.356
0.350







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "5lmv"(PDB-format) or 
 "5lmv"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1833.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.290004,0.401728,-0.868627 81.410016 center 0,0,0 model #1
move 180.279856,170.219373,172.099945 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!