+Open data
-Basic information
Entry | Database: PDB / ID: 2ckn | ||||||
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Title | NMR Structure of the First Ig Module of mouse FGFR1 | ||||||
Components | BASIC FIBROBLAST GROWTH FACTOR RECEPTOR 1 | ||||||
Keywords | TRANSFERASE / KINASE / HEPARIN-BINDING / NUCLEOTIDE-BINDING / IMMUNOGLOBULIN DOMAIN / ALTERNATICE SPLICING / ATP-BINDING / GLYCOPROTEIN / RECEPTOR / TYROSINE-PROTEIN KINASE | ||||||
Function / homology | Function and homology information motogenic signaling involved in postnatal olfactory bulb interneuron migration / FGFR1c and Klotho ligand binding and activation / Phospholipase C-mediated cascade: FGFR1 / regulation of phosphorus metabolic process / FGFR1b ligand binding and activation / FGFR1c ligand binding and activation / Downstream signaling of activated FGFR1 / SHC-mediated cascade:FGFR1 / Signal transduction by L1 / PI-3K cascade:FGFR1 ...motogenic signaling involved in postnatal olfactory bulb interneuron migration / FGFR1c and Klotho ligand binding and activation / Phospholipase C-mediated cascade: FGFR1 / regulation of phosphorus metabolic process / FGFR1b ligand binding and activation / FGFR1c ligand binding and activation / Downstream signaling of activated FGFR1 / SHC-mediated cascade:FGFR1 / Signal transduction by L1 / PI-3K cascade:FGFR1 / FRS-mediated FGFR1 signaling / PI3K Cascade / Negative regulation of FGFR1 signaling / vasculogenesis involved in coronary vascular morphogenesis / orbitofrontal cortex development / negative regulation of fibroblast growth factor production / positive regulation of mitotic cell cycle DNA replication / regulation of extrinsic apoptotic signaling pathway in absence of ligand / RAF/MAP kinase cascade / vitamin D3 metabolic process / positive regulation of hepatic stellate cell activation / regulation of phosphate transport / regulation of lateral mesodermal cell fate specification / positive regulation of MAPKKK cascade by fibroblast growth factor receptor signaling pathway / positive regulation of endothelial cell chemotaxis to fibroblast growth factor / receptor-receptor interaction / PIP3 activates AKT signaling / regulation of branching involved in salivary gland morphogenesis by mesenchymal-epithelial signaling / fibroblast growth factor receptor signaling pathway involved in orbitofrontal cortex development / regulation of sensory perception of pain / auditory receptor cell development / ventricular zone neuroblast division / multicellular organism development / mesenchymal cell differentiation / positive regulation of parathyroid hormone secretion / ear development / PI5P, PP2A and IER3 Regulate PI3K/AKT Signaling / paraxial mesoderm development / regulation of stem cell proliferation / fibroblast growth factor receptor activity / branching involved in salivary gland morphogenesis / organ induction / lung-associated mesenchyme development / positive regulation of kinase activity / positive regulation of fibroblast migration / outer ear morphogenesis / middle ear morphogenesis / embryonic limb morphogenesis / blood vessel morphogenesis / ureteric bud development / positive regulation of vascular endothelial cell proliferation / positive regulation of mesenchymal cell proliferation / inner ear morphogenesis / generation of neurons / midbrain development / stem cell population maintenance / central nervous system neuron development / fibroblast growth factor binding / plasma membrane => GO:0005886 / epithelial to mesenchymal transition / negative regulation of osteoblast differentiation / positive regulation of blood vessel endothelial cell migration / fibroblast growth factor receptor signaling pathway / chondrocyte differentiation / positive regulation of phospholipase C activity / salivary gland morphogenesis / positive regulation of cell cycle / cell maturation / positive regulation of cardiac muscle cell proliferation / positive regulation of neuron differentiation / cell adhesion molecule binding / SH2 domain binding / transmembrane receptor protein tyrosine kinase activity / positive regulation of cell differentiation / sensory perception of sound / lung development / brain development / positive regulation of MAP kinase activity / positive regulation of neuron projection development / receptor protein-tyrosine kinase / positive regulation of inflammatory response / peptidyl-tyrosine phosphorylation / neuron projection development / cell surface receptor protein tyrosine kinase signaling pathway / heparin binding / regulation of cell population proliferation / cytoplasmic vesicle / regulation of gene expression / angiogenesis / protein tyrosine kinase activity / in utero embryonic development / positive regulation of MAPK cascade / protein autophosphorylation / positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction / receptor complex / negative regulation of gene expression / signaling receptor binding / positive regulation of cell population proliferation / protein-containing complex binding / perinuclear region of cytoplasm Similarity search - Function | ||||||
Biological species | MUS MUSCULUS (house mouse) | ||||||
Method | SOLUTION NMR | ||||||
Authors | Kiselyov, V.V. / Bock, E. / Berezin, V. / Poulsen, F.M. | ||||||
Citation | Journal: Protein Sci. / Year: 2006 Title: NMR Structure of the First Ig Module of Mouse Fgfr1. Authors: Kiselyov, V.V. / Bock, E. / Berezin, V. / Poulsen, F.M. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 2ckn.cif.gz | 560.9 KB | Display | PDBx/mmCIF format |
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PDB format | pdb2ckn.ent.gz | 485.2 KB | Display | PDB format |
PDBx/mmJSON format | 2ckn.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/ck/2ckn ftp://data.pdbj.org/pub/pdb/validation_reports/ck/2ckn | HTTPS FTP |
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-Related structure data
Similar structure data | |
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Other databases |
-Links
-Assembly
Deposited unit |
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1 |
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NMR ensembles |
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-Components
#1: Protein | Mass: 10461.557 Da / Num. of mol.: 1 / Fragment: IG1 MODULE OF MOUSE FGFR1, RESIDUES 25-119 / Source method: obtained synthetically / Source: (synth.) MUS MUSCULUS (house mouse) References: UniProt: P16092, receptor protein-tyrosine kinase |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR |
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NMR details | Text: NONE |
-Sample preparation
Sample conditions | Temperature: 298.0 K |
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-NMR measurement
NMR spectrometer |
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-Processing
NMR software | Name: X-PLOR / Developer: BRUNGER / Classification: refinement |
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NMR ensemble | Conformers submitted total number: 20 |