- PDB-1yls: Crystal structure of selenium-modified Diels-Alder ribozyme compl... -
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Database: PDB / ID: 1yls
Title
Crystal structure of selenium-modified Diels-Alder ribozyme complexed with the product of the reaction between N-pentylmaleimide and covalently attached 9-hydroxymethylanthracene
SEQUENCE THE DAI HETGROUP IS CONNECTED TO THE 5' G OF THE 11-MER RNA VIA HEXAETHYLENEGLYCOL LINKER. ...SEQUENCE THE DAI HETGROUP IS CONNECTED TO THE 5' G OF THE 11-MER RNA VIA HEXAETHYLENEGLYCOL LINKER. THE LINKER IS NOT VISIBLE IN THE ELECTRON DENSITY.
Component-ID: 1 / End auth comp-ID: C / End label comp-ID: C / Refine code: 6
Dom-ID
Ens-ID
Beg auth comp-ID
Beg label comp-ID
End label seq-ID
Auth asym-ID
Label asym-ID
Auth seq-ID
Label seq-ID
1
1
DAI
DAI
11
A
E - A
100 - 111
2
1
DAI
DAI
11
C
M - C
100 - 111
1
2
G
G
B
B
201 - 238
1 - 38
2
2
G
G
D
D
201 - 238
1 - 38
NCS ensembles :
ID
1
2
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Components
#1: RNA chain
RNADiels-Alderribozyme
Mass: 3651.120 Da / Num. of mol.: 2 / Source method: obtained synthetically Details: This RNA was chemically synthesized. The sequence was derived from the in vitro selected ribozyme catalising Diels-Alder reaction between tethered anthracene and biotinylated maleimide
#2: RNA chain
RNADiels-Alderribozyme
Mass: 12586.280 Da / Num. of mol.: 2 / Mutation: A27G / Source method: obtained synthetically Details: This RNA was chemically synthesized. The sequence was derived from the in vitro selected ribozyme catalising Diels-Alder reaction between tethered anthracene and biotinylated maleimide
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