+Open data
-Basic information
Entry | Database: PDB / ID: 1wan | ||||||||||||||||||
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Title | DNA DTA TRIPLEX, NMR, 7 STRUCTURES | ||||||||||||||||||
Components | DNA (5'-D(*Keywords | DNA / TRIPLEX / INTERCALATOR / DEOXYRIBONUCLEIC ACID | Function / homology | DNA / DNA (> 10) | Function and homology information Method | SOLUTION NMR | Authors | Wang, E. / Koshlap, K.M. / Gillespie, P. / Dervan, P.B. / Feigon, J. | Citation | Journal: J.Mol.Biol. / Year: 1996 Title: Solution structure of a pyrimidine-purine-pyrimidine triplex containing the sequence-specific intercalating non-natural base D3. Authors: Wang, E. / Koshlap, K.M. / Gillespie, P. / Dervan, P.B. / Feigon, J. #1: Journal: J.Am.Chem.Soc. / Year: 1993 Title: Nonnatural Deoxyribonucleoside D3 Incorporated in an Intramolecular DNA Triplex Binds Sequence-Specifically by Intercalation Authors: Koshlap, K.M. / Gillespie, P. / Dervan, P.B. / Feigon, J. History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 1wan.cif.gz | 145.4 KB | Display | PDBx/mmCIF format |
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PDB format | pdb1wan.ent.gz | 123.8 KB | Display | PDB format |
PDBx/mmJSON format | 1wan.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/wa/1wan ftp://data.pdbj.org/pub/pdb/validation_reports/wa/1wan | HTTPS FTP |
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-Related structure data
Similar structure data |
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-Links
-Assembly
Deposited unit |
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1 |
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NMR ensembles |
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-Components
#1: DNA chain | Mass: 9828.443 Da / Num. of mol.: 1 / Source method: obtained synthetically Details: THE STANDARD DNA BASE AT POSITION 28 HAS BEEN REPLACED BY THE NON-NATURAL SYNTHETIC BASE DP, 1-(2-DEOXY-BETA-D-RIBOFURANOSYL)-4-(3-BENZAMIDO) PHENYLIMIDAZOLE |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR |
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NMR details | Text: 2MM DNA, 100MM NACL, 5MM MGCL2 |
-Sample preparation
Sample conditions | pH: 5.2 / Temperature: 298 K |
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Crystal grow | *PLUS Method: other / Details: NMR |
-Processing
Software |
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NMR software | Name: X-PLOR / Version: 3.1 / Developer: BRUNGER / Classification: refinement | ||||||||||||
NMR ensemble | Conformers submitted total number: 7 |