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- PDB-1or5: SOLUTION STRUCTURE OF THE HOLO-FORM OF THE FRENOLICIN ACYL CARRIE... -

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Basic information

Entry
Database: PDB / ID: 1or5
TitleSOLUTION STRUCTURE OF THE HOLO-FORM OF THE FRENOLICIN ACYL CARRIER PROTEIN, MINIMIZED MEAN STRUCTURE
Componentsacyl carrier protein
KeywordsBIOSYNTHETIC PROTEIN / ACYL CARRIER PROTEIN / ACP / BIOSYNTHESIS / FRENOLICIN / HOLO / POLYKETIDE SYNTHASE / PKS
Function / homologyACP-like / Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A / Phosphopantetheine attachment site / ACP-like superfamily / Carrier protein (CP) domain profile. / Phosphopantetheine binding ACP domain / Orthogonal Bundle / Mainly Alpha / Acyl carrier protein
Function and homology information
Biological speciesStreptomyces roseofulvus (bacteria)
MethodSOLUTION NMR / TORSION ANGLE DYNAMICS SIMULATED ANNEALING
AuthorsLi, Q. / Khosla, C. / Puglisi, J. / Liu, C.W.
CitationJournal: Biochemistry / Year: 2003
Title: Solution Structure and Backbone Dynamics of the Holo Form of the Frenolicin Acyl Carrier Protein
Authors: Li, Q. / Khosla, C. / Puglisi, J.D. / Liu, C.W.
History
DepositionMar 11, 2003Deposition site: RCSB / Processing site: RCSB
Revision 1.0Jul 1, 2003Provider: repository / Type: Initial release
Revision 1.1Apr 29, 2008Group: Version format compliance
Revision 1.2Jul 13, 2011Group: Version format compliance
Revision 1.3Feb 23, 2022Group: Data collection / Database references / Derived calculations
Category: database_2 / pdbx_nmr_software ...database_2 / pdbx_nmr_software / pdbx_struct_assembly / pdbx_struct_oper_list
Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession / _pdbx_nmr_software.name

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

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Assembly

Deposited unit
A: acyl carrier protein


Theoretical massNumber of molelcules
Total (without water)8,8001
Polymers8,8001
Non-polymers00
Water0
1


  • Idetical with deposited unit
  • defined by author
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
NMR ensembles
DataCriteria
Number of conformers (submitted / calculated)1 / -
Representative

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Components

#1: Protein acyl carrier protein / / FREN N / FREN ACP


Mass: 8799.721 Da / Num. of mol.: 1
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Streptomyces roseofulvus (bacteria) / Plasmid: PET21C-FRENACP / Species (production host): Escherichia coli / Production host: Escherichia coli BL21(DE3) (bacteria) / Strain (production host): BL21DE3 / References: UniProt: Q54996

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Experimental details

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Experiment

ExperimentMethod: SOLUTION NMR
NMR experiment
Conditions-IDExperiment-IDSolution-IDType
111HN(CA)CB
121C(CO)NH
131H(CCO)NH
141(H)CCH-TOCSY
151(H)CCH-COSY
161HNHA
17113C/15N-HSQC-NOESY
18115N-HSQC-NOESY
NMR detailsText: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR SPECTROSCOPY.

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Sample preparation

DetailsContents: 0.7 TO 1.2 MM 15N,13C 30 MM SODIUM PHOSPHATE PH 5.5; 2 MM DTT; 0.5% NAN3
Sample conditionsIonic strength: 30 mM PHOSPHATE / pH: 5.5 / Pressure: AMBIENT / Temperature: 288.00 K
Crystal grow
*PLUS
Method: other / Details: NMR

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NMR measurement

RadiationProtocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M
Radiation wavelengthRelative weight: 1
NMR spectrometer
TypeManufacturerModelField strength (MHz)Spectrometer-ID
Varian INOVAVarianINOVA5001
Varian INOVAVarianINOVA8002

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Processing

NMR software
NameVersionClassification
DYANA1.5refinement
NMRPipestructure solution
Sparkystructure solution
RefinementMethod: TORSION ANGLE DYNAMICS SIMULATED ANNEALING / Software ordinal: 1
NMR ensembleConformers submitted total number: 1

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