[English] 日本語
Yorodumi Species
- Taxonomy data in EMDB/PDB/SASBDB -

Search query

Name, Taxonomy-ID, or Keywords:

Taxonomy info

NameChlamydomonas reinhardtii
Name *1Chlamydomonas reinhardtii
Other names *1synonym: Chlamydomonas smithii / misspelling: Chlamydomonas reihhardtii / Chlamydonas reinhardtii / includes: Chlamydomonas reinhardtii strain CC-1373 / others: Chlamydomonas reinhardtii P.A.Dangeard / Chlamydomonas smithii R.W.Howshaw & H.Ettl ...Chlamydomonas reinhardtii P.A.Dangeard / Chlamydomonas smithii R.W.Howshaw & H.Ettl / SAG 53.72 [[Chlamydomonas smithii]] / SAG 54.72 [[Chlamydomonas smithii]] / UTEX 90
NCBI Taxonomy ID3055
Lineage *1cellular organisms > Eukaryota > Viridiplantae > Chlorophyta > Chlorophyceae > Chlamydomonadales > Chlamydomonadaceae > Chlamydomonas
WikipediaWikipedia - Chlamydomonas reinhardtii: Chlamydomonas reinhardtii is a single-cell green alga about 10 micrometres in diameter that swims with two flagella. It has a cell wall made of hydroxyproline-rich glycoproteins, a large cup-shaped chloroplast, a large pyrenoid, and an "eyespot" that senses light.

Chlamydomonas species are widely distributed worldwide in soil and fresh water...

References*1: NCBI Taxonomy

About Yorodumi Species


Jul 12, 2017. Major update of PDB

Major update of PDB

  • wwPDB released updated PDB data conforming to the new PDBx/mmCIF dictionary. This is a major update changing the version number from 4 to 5, and with Remediation, in which all the entries are updated. See below links for details.
  • In this update, many items about electron microscopy experimental information are reorganized (e.g. em_software). Now, EM Navigator and Yorodumi are based on the updated data.

External links: wwPDB Remediation / Enriched Model Files Conforming to OneDep Data Standards Now Available in the PDB FTP Archive

Jun 16, 2017. Omokage search with filter

Omokage search with filter

  • Result of Omokage search can be filtered by keywords and the database types

Related info.: Omokage search

Sep 15, 2016. EM Navigator & Yorodumi renewed

EM Navigator & Yorodumi renewed

  • New versions of EM Navigator and Yorodumi started

Related info.: Changes in new EM Navigator and Yorodumi

Aug 31, 2016. New EM Navigator & Yorodumi

New EM Navigator & Yorodumi

  • In 15th Sep 2016, the development versions of EM Navigator and Yorodumi will replace the official versions.
  • Current version will continue as 'legacy version' for some time.

Related info.: Changes in new EM Navigator and Yorodumi / EM Navigator / Yorodumi

Apr 13, 2016. Omokage search got faster

Omokage search got faster

  • The computation time became ~1/2 compared to the previous version by re-optimization of data accession
  • Enjoy "shape similarity" of biomolecules, more!

Related info.: Omokage search

Read more

Yorodumi Speices

Taxonomy data in EMDB/PDB/SASBDB

  • Taxonomy database of sample sources of data in EMDB/PDB/SASBDB

Related info.: EMDB / PDB / SASBDB / Comparison of 3 databanks

Read more