登録情報 | データベース: PDB / ID: 7cvp |
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タイトル | The Crystal Structure of human PHGDH from Biortus. |
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要素 | D-3-phosphoglycerate dehydrogenase |
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キーワード | OXIDOREDUCTASE (酸化還元酵素) / catalytic activity / electron transfer activity (電子移動反応) / oxidoreductase activity (酸化還元酵素) |
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機能・相同性 | 機能・相同性情報
gamma-aminobutyric acid metabolic process / threonine metabolic process / 2-oxoglutarate reductase / glial cell development / ホスホグリセリン酸デヒドロゲナーゼ / phosphoglycerate dehydrogenase activity / taurine metabolic process / Serine biosynthesis / glycine metabolic process / リンゴ酸デヒドロゲナーゼ ...gamma-aminobutyric acid metabolic process / threonine metabolic process / 2-oxoglutarate reductase / glial cell development / ホスホグリセリン酸デヒドロゲナーゼ / phosphoglycerate dehydrogenase activity / taurine metabolic process / Serine biosynthesis / glycine metabolic process / リンゴ酸デヒドロゲナーゼ / L-serine biosynthetic process / L-malate dehydrogenase activity / neural tube development / G1 to G0 transition / spinal cord development / glutamine metabolic process / brain development / neuron projection development / NAD binding / 遺伝子発現の調節 / electron transfer activity / extracellular exosome / 細胞質基質類似検索 - 分子機能 D-3-phosphoglycerate dehydrogenase / D-3-phosphoglycerate dehydrogenase, ASB domain / D-3-phosphoglycerate dehydrogenase intervening domain / Allosteric substrate binding domain superfamily / D-isomer specific 2-hydroxyacid dehydrogenases signature 2. / D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. / D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 / D-isomer specific 2-hydroxyacid dehydrogenases signature 3. / D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site / D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ...D-3-phosphoglycerate dehydrogenase / D-3-phosphoglycerate dehydrogenase, ASB domain / D-3-phosphoglycerate dehydrogenase intervening domain / Allosteric substrate binding domain superfamily / D-isomer specific 2-hydroxyacid dehydrogenases signature 2. / D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. / D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 / D-isomer specific 2-hydroxyacid dehydrogenases signature 3. / D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site / D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain / D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain / D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain / D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain / NAD(P)-binding domain superfamily類似検索 - ドメイン・相同性 NICOTINAMIDE-ADENINE-DINUCLEOTIDE / D-3-phosphoglycerate dehydrogenase類似検索 - 構成要素 |
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生物種 | Homo sapiens (ヒト) |
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手法 | X線回折 / シンクロトロン / 分子置換 / 解像度: 2.5 Å |
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データ登録者 | Wang, F. / Lv, Z. / Cheng, W. / Lin, D. / Miao, Q. / Huang, Y. |
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引用 | ジャーナル: To Be Published タイトル: The Crystal Structure of human PHGDH from Biortus. 著者: Wang, F. / Lv, Z. / Cheng, W. / Lin, D. / Miao, Q. / Huang, Y. |
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履歴 | 登録 | 2020年8月26日 | 登録サイト: PDBJ / 処理サイト: PDBJ |
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改定 1.0 | 2020年9月9日 | Provider: repository / タイプ: Initial release |
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改定 1.1 | 2023年11月29日 | Group: Data collection / Database references ...Data collection / Database references / Derived calculations / Refinement description カテゴリ: atom_type / chem_comp_atom ...atom_type / chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model Item: _atom_type.pdbx_N_electrons / _atom_type.pdbx_scat_Z ..._atom_type.pdbx_N_electrons / _atom_type.pdbx_scat_Z / _database_2.pdbx_DOI / _database_2.pdbx_database_accession |
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