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Yorodumi- PDB-5udq: LarE, a sulfur transferase involved in synthesis of the cofactor ... -
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Open data
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Basic information
| Entry | Database: PDB / ID: 5udq | ||||||
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| Title | LarE, a sulfur transferase involved in synthesis of the cofactor for lactate racemase, apo form | ||||||
Components | Lactate racemization operon protein LarE | ||||||
Keywords | TRANSFERASE / Lar / sulfur transferase / LarE / AMPylation / hexamer / trimer / PP-loop / ATP pyrophophatase domain / lactate / lactate racemization / lactate racemase | ||||||
| Function / homology | Function and homology informationintrinsic cysteine-dependent pyridinium-3,5-bisthiocarboxylic acid mononucleotide synthase / sulfurtransferase activity / lyase activity / ATP binding Similarity search - Function | ||||||
| Biological species | Lactobacillus plantarum (bacteria) | ||||||
| Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / molecular replacement / Resolution: 2.09 Å | ||||||
Authors | Fellner, M. / Desguin, B. / Hausinger, R.P. / Hu, J. | ||||||
| Funding support | United States, 1items
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Citation | Journal: Proc. Natl. Acad. Sci. U.S.A. / Year: 2017Title: Structural insights into the catalytic mechanism of a sacrificial sulfur insertase of the N-type ATP pyrophosphatase family, LarE. Authors: Fellner, M. / Desguin, B. / Hausinger, R.P. / Hu, J. | ||||||
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Structure visualization
| Structure viewer | Molecule: Molmil Jmol/JSmol |
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Downloads & links
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Download
| PDBx/mmCIF format | 5udq.cif.gz | 605.9 KB | Display | PDBx/mmCIF format |
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| PDB format | pdb5udq.ent.gz | 502.4 KB | Display | PDB format |
| PDBx/mmJSON format | 5udq.json.gz | Tree view | PDBx/mmJSON format | |
| Others | Other downloads |
-Validation report
| Summary document | 5udq_validation.pdf.gz | 496.8 KB | Display | wwPDB validaton report |
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| Full document | 5udq_full_validation.pdf.gz | 508 KB | Display | |
| Data in XML | 5udq_validation.xml.gz | 67.1 KB | Display | |
| Data in CIF | 5udq_validation.cif.gz | 88.4 KB | Display | |
| Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/ud/5udq ftp://data.pdbj.org/pub/pdb/validation_reports/ud/5udq | HTTPS FTP |
-Related structure data
| Related structure data | ![]() 5udrC ![]() 5udsC ![]() 5udtC ![]() 5uduC ![]() 5udvC ![]() 5udwC ![]() 5udxC ![]() 5unmC C: citing same article ( |
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| Similar structure data |
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Assembly
| Deposited unit | ![]()
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| Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments: Ens-ID: 1
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About Yorodumi



Lactobacillus plantarum (bacteria)
X-RAY DIFFRACTION
United States, 1items
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