+Open data
-Basic information
Entry | Database: PDB / ID: 1yua | ||||||
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Title | C-TERMINAL DOMAIN OF ESCHERICHIA COLI TOPOISOMERASE I | ||||||
Components | TOPOISOMERASE I | ||||||
Keywords | DNA BINDING PROTEIN / GENE-REGULATING PROTEIN | ||||||
Function / homology | Function and homology information DNA topoisomerase activity / DNA topoisomerase / DNA topoisomerase type I (single strand cut, ATP-independent) activity / DNA topological change / chromosome / DNA binding / metal ion binding / cytosol Similarity search - Function | ||||||
Biological species | Escherichia coli (E. coli) | ||||||
Method | SOLUTION NMR | ||||||
Authors | Yu, L. / Zhu, C.-X. / Tse-Dinh, Y.-C. / Fesik, S.W. | ||||||
Citation | Journal: Biochemistry / Year: 1995 Title: Solution structure of the C-terminal single-stranded DNA-binding domain of Escherichia coli topoisomerase I. Authors: Yu, L. / Zhu, C.X. / Tse-Dinh, Y.C. / Fesik, S.W. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 1yua.cif.gz | 976.4 KB | Display | PDBx/mmCIF format |
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PDB format | pdb1yua.ent.gz | 815.4 KB | Display | PDB format |
PDBx/mmJSON format | 1yua.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/yu/1yua ftp://data.pdbj.org/pub/pdb/validation_reports/yu/1yua | HTTPS FTP |
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-Related structure data
Similar structure data |
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-Links
-Assembly
Deposited unit |
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1 |
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Atom site foot note | 1: CIS PROLINE - PRO 44 MODEL 1 / 2: CIS PROLINE - PRO 44 MODEL 2 / 3: CIS PROLINE - PRO 44 MODEL 3 / 4: CIS PROLINE - PRO 44 MODEL 4 / 5: CIS PROLINE - PRO 44 MODEL 5 / 6: CIS PROLINE - PRO 44 MODEL 6 / 7: CIS PROLINE - PRO 44 MODEL 7 / 8: CIS PROLINE - PRO 44 MODEL 8 / 9: CIS PROLINE - PRO 44 MODEL 9 / 10: CIS PROLINE - PRO 44 MODEL 10 / 11: CIS PROLINE - PRO 44 MODEL 11 / 12: CIS PROLINE - PRO 44 MODEL 12 / 13: CIS PROLINE - PRO 44 MODEL 13 / 14: CIS PROLINE - PRO 44 MODEL 14 / 15: CIS PROLINE - PRO 44 MODEL 15 / 16: CIS PROLINE - PRO 44 MODEL 16 / 17: CIS PROLINE - PRO 44 MODEL 17 / 18: CIS PROLINE - PRO 44 MODEL 18 / 19: CIS PROLINE - PRO 44 MODEL 19 / 20: CIS PROLINE - PRO 44 MODEL 20 / 21: CIS PROLINE - PRO 44 MODEL 21 / 22: CIS PROLINE - PRO 44 MODEL 22 / 23: CIS PROLINE - PRO 44 MODEL 23 / 24: CIS PROLINE - PRO 44 MODEL 24 / 25: CIS PROLINE - PRO 44 MODEL 25 / 26: CIS PROLINE - PRO 44 MODEL 26 | |||||||||
NMR ensembles |
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-Components
#1: Protein | Mass: 13860.677 Da / Num. of mol.: 1 / Fragment: 122 C-TERMINAL RESIDUES Source method: isolated from a genetically manipulated source Source: (gene. exp.) Escherichia coli (E. coli) / Strain: DH5AI / Plasmid: PJW312 Gene (production host): C-TERMINAL FRAGMENT OF ESCHERICHIA COLI TOPOISOMERASE I Production host: Escherichia coli (E. coli) / References: UniProt: P06612, DNA topoisomerase |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR |
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-Sample preparation
Crystal grow | *PLUS Method: other |
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-Processing
Software |
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NMR software | Name: X-PLOR / Developer: BRUNGER / Classification: refinement | ||||||||
NMR ensemble | Conformers submitted total number: 26 |