nuclear polyadenylation-dependent antisense transcript catabolic process / nuclear polyadenylation-dependent snoRNA catabolic process / nuclear polyadenylation-dependent snRNA catabolic process / tRNA wobble cytosine modification / nuclear polyadenylation-dependent mRNA catabolic process / tRNA cytidine N4-acetyltransferase activity / rRNA acetylation involved in maturation of SSU-rRNA / 18S rRNA cytidine N-acetyltransferase activity / regulation of ribosomal protein gene transcription by RNA polymerase II / U1 snRNA 3'-end processing ...nuclear polyadenylation-dependent antisense transcript catabolic process / nuclear polyadenylation-dependent snoRNA catabolic process / nuclear polyadenylation-dependent snRNA catabolic process / tRNA wobble cytosine modification / nuclear polyadenylation-dependent mRNA catabolic process / tRNA cytidine N4-acetyltransferase activity / rRNA acetylation involved in maturation of SSU-rRNA / 18S rRNA cytidine N-acetyltransferase activity / regulation of ribosomal protein gene transcription by RNA polymerase II / U1 snRNA 3'-end processing / tRNA acetylation / box H/ACA snoRNA binding / nuclear polyadenylation-dependent CUT catabolic process / U5 snRNA 3'-end processing / TRAMP-dependent tRNA surveillance pathway / RNA fragment catabolic process / exosome (RNase complex) / rRNA small subunit pseudouridine methyltransferase Nep1 / CURI complex / UTP-C complex / rRNA 2'-O-methylation / Noc4p-Nop14p complex / endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / U4 snRNA 3'-end processing / nuclear polyadenylation-dependent rRNA catabolic process / poly(A)-dependent snoRNA 3'-end processing / t-UTP complex / nuclear exosome (RNase complex) / Pwp2p-containing subcomplex of 90S preribosome / nuclear microtubule / Mpp10 complex / rRNA (pseudouridine) methyltransferase activity / exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / box C/D sno(s)RNA binding / snoRNA guided rRNA 2'-O-methylation / rRNA modification / histone H2AQ104 methyltransferase activity / septum digestion after cytokinesis / regulation of rRNA processing / tRNA re-export from nucleus / snRNA binding / histone mRNA catabolic process / RNA folding chaperone / box C/D sno(s)RNA 3'-end processing / nuclear mRNA surveillance / rRNA methyltransferase activity / rDNA heterochromatin / endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery / maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S) / regulation of transcription by RNA polymerase I / endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / box C/D methylation guide snoRNP complex / U4/U6 snRNP / positive regulation of rRNA processing / tRNA export from nucleus / single-stranded telomeric DNA binding / rRNA primary transcript binding / small nuclear ribonucleoprotein complex / sno(s)RNA-containing ribonucleoprotein complex / Negative regulators of DDX58/IFIH1 signaling / rRNA base methylation / O-methyltransferase activity / U4 snRNA binding / SUMOylation of RNA binding proteins / protein localization to nucleolus / 90S preribosome assembly / RNA catabolic process / mTORC1-mediated signalling / rRNA methylation / Protein hydroxylation / mRNA modification / regulation of telomere maintenance / U4 snRNP / poly(U) RNA binding / U3 snoRNA binding / positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay / Formation of the ternary complex, and subsequently, the 43S complex / poly(A)+ mRNA export from nucleus / Translation initiation complex formation / Ribosomal scanning and start codon recognition / snoRNA binding / precatalytic spliceosome / preribosome, small subunit precursor / Major pathway of rRNA processing in the nucleolus and cytosol / establishment of cell polarity / spliceosomal complex assembly / positive regulation of transcription by RNA polymerase I / SRP-dependent cotranslational protein targeting to membrane / GTP hydrolysis and joining of the 60S ribosomal subunit / nucleolar large rRNA transcription by RNA polymerase I / Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC) / Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) / Formation of a pool of free 40S subunits / L13a-mediated translational silencing of Ceruloplasmin expression / 90S preribosome / Ub-specific processing proteases / proteasome assembly / RNA processing 類似検索 - 分子機能
Exosome-associated factor Rrp6, N-terminal / Apoptosis-antagonizing transcription factor, C-terminal / AATF leucine zipper-containing domain / Protein AATF/Bfr2 / Exosome complex exonuclease Rrp6-like / : / PMC2NT (NUC016) domain / Apoptosis-antagonizing transcription factor, C-terminal / Apoptosis antagonizing transcription factor / NUC153 ...Exosome-associated factor Rrp6, N-terminal / Apoptosis-antagonizing transcription factor, C-terminal / AATF leucine zipper-containing domain / Protein AATF/Bfr2 / Exosome complex exonuclease Rrp6-like / : / PMC2NT (NUC016) domain / Apoptosis-antagonizing transcription factor, C-terminal / Apoptosis antagonizing transcription factor / NUC153 / Nucleolar protein 10/Enp2 / : / : / NUC153 domain / Nucleolar protein 10-like, second domain / Nucleolar protein 10-like, N-terminal domain / rRNA biogenesis protein Rrp5 / : / : / U3 small nucleolar RNA-associated protein 8 / : / Utp8, N-terminal beta propeller / Utp8, C-terminal / Possible tRNA binding domain / RNA cytidine acetyltransferase NAT10 / Possible tRNA binding domain / Helicase domain / tRNA(Met) cytidine acetyltransferase TmcA, N-terminal / TmcA/NAT10/Kre33 / RNA cytidine acetyltransferase NAT10/TcmA, helicase domain / tRNA(Met) cytidine acetyltransferase TmcA, N-terminal / GNAT acetyltransferase 2 / U3 snoRNA associated / U3 snoRNA associated / Sof1-like protein / U3 small nucleolar RNA-associated protein 20, N-terminal / U3 small nucleolar RNA-associated protein 20, C-terminal / : / : / Sof1-like domain / U3 small nucleolar RNA-associated protein 20, N-terminal / U3 small nucleolar RNA-associated protein 20 domain / Small subunit processome component 20 homolog, C-terminal / WD repeat-containing protein 75 second beta-propeller / NOL6/Upt22 / BING4, C-terminal domain / Nucleolar complex protein 4 / Nrap protein domain 1 / Nrap protein, domain 2 / Nrap protein, domain 3 / Nrap protein, domain 4 / Nrap protein, domain 5 / Nrap protein, domain 6 / WD repeat-containing protein WDR46/Utp7 / Nrap protein domain 1 / BING4CT (NUC141) domain / Nrap protein PAP/OAS-like domain / Nrap protein domain 3 / Nrap protein nucleotidyltransferase domain 4 / Nrap protein PAP/OAS1-like domain 5 / Nrap protein domain 6 / BING4CT (NUC141) domain / U3 small nucleolar RNA-associated protein 6 / Ribosomal RNA-processing protein 7, C-terminal domain / Ribosomal RNA-processing protein 7 / Rrp7, RRM-like N-terminal domain / : / U3 small nucleolar RNA-associated protein 6 / Ribosomal RNA-processing protein 7 (RRP7) C-terminal domain / Rrp7 RRM-like N-terminal domain / U3 small nucleolar RNA-associated protein 4 / Small-subunit processome, Utp11 / Nucleolar protein 14 / Fcf2 pre-rRNA processing, C-terminal / Fcf2/DNTTIP2 / : / Utp11 protein / Nop14-like family / Fcf2 pre-rRNA processing / : / U3 small nucleolar RNA-associated protein 15, C-terminal / UTP15 C terminal / rRNA-processing protein Fcf1, PIN domain / WDR3 second beta-propeller domain / WDR3 first beta-propeller domain / Small-subunit processome, Utp14 / U3 small nucleolar RNA-associated protein 18 / Utp14 protein / U3 small nucleolar RNA-associated protein 13, C-terminal / Periodic tryptophan protein 2 / Utp13 specific WD40 associated domain / BP28, C-terminal domain / Nucleolar protein 58/56, N-terminal / U3 small nucleolar RNA-associated protein 10, N-terminal / U3 small nucleolar RNA-associated protein 10 / : / BP28CT (NUC211) domain / NOP5NT (NUC127) domain / U3 small nucleolar RNA-associated protein 10 / HEATR1-like, HEAT repeats 類似検索 - ドメイン・相同性
: / : / RNA / RNA (> 10) / RNA (> 100) / RNA (> 1000) / Small ribosomal subunit protein uS4A / Small ribosomal subunit protein uS15 / Ubiquitin-ribosomal protein eS31 fusion protein / Small ribosomal subunit protein uS11A ...: / : / RNA / RNA (> 10) / RNA (> 100) / RNA (> 1000) / Small ribosomal subunit protein uS4A / Small ribosomal subunit protein uS15 / Ubiquitin-ribosomal protein eS31 fusion protein / Small ribosomal subunit protein uS11A / Small ribosomal subunit protein eS19A / Small ribosomal subunit protein uS8A / Small ribosomal subunit protein uS12A / Small ribosomal subunit protein eS24A / Small ribosomal subunit protein eS4A / Small ribosomal subunit protein eS6A / Small ribosomal subunit protein eS8A / Small ribosomal subunit protein uS17A / Small ribosomal subunit protein uS9A / Small ribosomal subunit protein uS13A / rRNA 2'-O-methyltransferase fibrillarin / Ribosomal RNA-processing protein 7 / Periodic tryptophan protein 2 / Small ribosomal subunit protein uS7 / Small ribosomal subunit protein eS7A / U3 small nucleolar ribonucleoprotein protein IMP3 / Small ribosomal subunit protein eS1A / Protein SOF1 / U3 small nucleolar RNA-associated protein 11 / U3 small nucleolar RNA-associated protein 20 / Small ribosomal subunit protein eS27A / Essential nuclear protein 1 / U3 small nucleolar RNA-associated protein 9 / 13 kDa ribonucleoprotein-associated protein / U3 small nucleolar RNA-associated protein 7 / U3 small nucleolar ribonucleoprotein protein LCP5 / U3 small nucleolar RNA-associated protein 18 / U3 small nucleolar RNA-associated protein 10 / U3 small nucleolar RNA-associated protein MPP10 / Ribosome biogenesis protein ENP2 / Small ribosomal subunit protein eS12 / U3 small nucleolar RNA-associated protein 22 / U3 small nucleolar RNA-associated protein 8 / RNA cytidine acetyltransferase / U3 small nucleolar ribonucleoprotein protein IMP4 / U3 small nucleolar RNA-associated protein 6 / NET1-associated nuclear protein 1 / U3 small nucleolar RNA-associated protein 5 / Probable ATP-dependent RNA helicase DHR1 / U3 small nucleolar RNA-associated protein 15 / U3 small nucleolar RNA-associated protein 14 / rRNA biogenesis protein RRP5 / rRNA-processing protein FCF1 / U3 small nucleolar RNA-associated protein 13 / U3 small nucleolar RNA-associated protein 21 / Ribosomal RNA small subunit methyltransferase NEP1 / Ribosomal RNA-processing protein 9 / Nucleolar complex protein 4 / Protein BFR2 / U3 small nucleolar RNA-associated protein 4 / rRNA processing protein RCL1 / U3 small nucleolar RNA-associated protein 16 / Ribosome biogenesis protein BMS1 / rRNA-processing protein FCF2 / Something about silencing protein 10 / Exosome complex exonuclease RRP6 / U3 small nucleolar RNA-associated protein 12 / Nucleolar protein 56 / Nucleolar protein 58 / Small ribosomal subunit protein eS28A / Nucleolar complex protein 14 / Pre-rRNA-processing protein PNO1 類似検索 - 構成要素
L0: 5'ETS rRNA L1: 18S rRNA L2: U3 snoRNA L3: 40S ribosomal protein S18-A L4: 40S ribosomal protein S4-A L5: 40S ribosomal protein S5 L6: 40S ribosomal protein S6-A L7: 40S ribosomal protein S7-A L8: 40S ribosomal protein S8-A L9: 40S ribosomal protein S9-A LC: 40S ribosomal protein S16-A LD: 40S ribosomal protein S11-A LE: 40S ribosomal protein S22-A LF: 40S ribosomal protein S24-A LG: 40S ribosomal protein S28-A LH: NET1-associated nuclear protein 1 LI: U3 small nucleolar RNA-associated protein 8 LJ: U3 small nucleolar RNA-associated protein 15 LK: U3 small nucleolar RNA-associated protein 9 LL: U3 small nucleolar RNA-associated protein 5 LM: U3 small nucleolar RNA-associated protein 10 LN: U3 small nucleolar RNA-associated protein 4 LO: Periodic tryptophan protein 2 LP: U3 small nucleolar RNA-associated protein 6 LQ: U3 small nucleolar RNA-associated protein 12 LR: U3 small nucleolar RNA-associated protein 13 LS: U3 small nucleolar RNA-associated protein 18 LT: U3 small nucleolar RNA-associated protein 21 LU: Protein SOF1 LV: Ribosome biogenesis protein ENP2 LW: U3 small nucleolar RNA-associated protein 7 LX: RNA cytidine acetyltransferase LY: RNA cytidine acetyltransferase LZ: U3 small nucleolar ribonucleoprotein protein IMP3 NA: U3 small nucleolar RNA-associated protein MPP10 NB: Something about silencing protein 10 NC: U3 small nucleolar ribonucleoprotein protein LCP5 ND: Bud site selection protein 21 NF: 40S ribosomal protein S13 NG: 40S ribosomal protein S14-A NH: U3 small nucleolar RNA-associated protein 22 NI: Ribosomal RNA-processing protein 7 NM: Small ribosomal subunit protein eS1A NN: Protein BFR2 NP: 40S ribosomal protein S19-A NQ: 40S ribosomal protein S27-A NS: Probable ATP-dependent RNA helicase DHR1 NV: Exosome complex exonuclease RRP6 OA: rRNA biogenesis protein RRP5 OH: 40S ribosomal protein S12 OU: Ubiquitin-40S ribosomal protein S31 SA: Nucleolar protein 56 SB: Nucleolar protein 58 SC: rRNA 2'-O-methyltransferase fibrillarin SD: rRNA 2'-O-methyltransferase fibrillarin SE: 13 kDa ribonucleoprotein-associated protein SF: 13 kDa ribonucleoprotein-associated protein SG: Ribosomal RNA-processing protein 9 SH: RNA 3'-terminal phosphate cyclase-like protein SI: Ribosome biogenesis protein BMS1 SJ: Ribosomal RNA small subunit methyltransferase NEP1 SK: Ribosomal RNA small subunit methyltransferase NEP1 SL: rRNA-processing protein FCF1 SM: U3 small nucleolar ribonucleoprotein protein IMP4 SP: U3 small nucleolar RNA-associated protein 20 SQ: rRNA-processing protein FCF2 SR: 40S ribosomal protein S23-A SS: U3 small nucleolar RNA-associated protein 14 ST: Nucleolar complex protein 14 SU: Nucleolar complex protein 4 SW: Pre-rRNA-processing protein PNO1 SY: U3 small nucleolar RNA-associated protein 11 SZ: Essential nuclear protein 1
NET1-associatednuclearprotein1 / U three protein 17 / t-17 / U3 protein 17 required for transcription / U3 small nucleolar RNA- ...U three protein 17 / t-17 / U3 protein 17 required for transcription / U3 small nucleolar RNA-associated protein 17 / U3 snoRNA-associated protein 17
rRNAbiogenesisproteinRRP5 / Ribosomal RNA-processing protein 5 / U3 small nucleolar RNA-associated protein RRP5 / U3 snoRNA- ...Ribosomal RNA-processing protein 5 / U3 small nucleolar RNA-associated protein RRP5 / U3 snoRNA-associated protein RRP5
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基本情報
要素
キーワード
機能・相同性情報
Saccharomyces cerevisiae S288C (パン酵母)
データ登録者
米国, 2件 
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PDBj
集合体
試料調製
電子顕微鏡撮影
FIELD EMISSION GUN / 加速電圧: 300 kV / 照射モード: OTHER
解析