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Showing 1 - 50 of 7,763 items (all data)

EMDB-3600:
Contracted sheath of a Pseudomonas aeruginosa type six secretion system consisting of TssB1 and TssC1

EMDB-3880:
Coxsackievirus A24v in complex with the D1-D2 fragment of ICAM-1

EMDB-3985:
PilQ from Thermus thermophilus

EMDB-3995:
Cap domain and N5 ring of PilQ from Thermus thermophilus

EMDB-3996:
N4 ring of PilQ from Thermus thermophilus

EMDB-3997:
N2 and N3 ring of PilQ from Thermus thermophilus

EMDB-3998:
N0 and N1 ring of PilQ from Thermus thermophilus

EMDB-6728:
Anti-CRISPR protein AcrF1/2 bound to Csy surveillance complex with a 20nt spacer crRNA

EMDB-6729:
Anti-CRISPR proteins AcrF1/2 bound to Csy surveillance complex with a 32nt spacer crRNA backbone region

EMDB-6730:
Anti-CRISPR protein AcrF1 bound to Csy surveillance complex with 32nt spacer crRNA in binding mode B

EMDB-6731:
Anti-CRISPR proteins AcrF1/2 bound to Csy surveillance complex with a 20nt spacer crRNA backbone region

EMDB-7066:
Cryo-EM structure of human insulin degrading enzyme in complex with FAB H11 heavy chain and FAB H11 light chain

EMDB-7077:
Model for compact volume of truncated monomeric Cytohesin-3 (Grp1; amino acids 63-399) E161A 6GS Arf6 Q67L fusion protein

EMDB-7078:
Model for extended volume of truncated monomeric Cytohesin-3 (Grp1; amino acids 63-399) E161A Arf6 Q67L fusion protein

EMDB-7115:
Structure of bare actin filament

EMDB-7116:
CryoEM structure of MyosinVI-actin complex in the rigor (nucleotide-free) state

EMDB-7117:
CryoEM structure of Myosin VI-Actin complex in the ADP state

EMDB-7292:
Drosophila Dicer-2 (apo, intact helicase density)

PDB-5n8n:
Contracted sheath of a Pseudomonas aeruginosa type six secretion system consisting of TssB1 and TssC1

PDB-5xlo:
Anti-CRISPR proteins AcrF1/2 bound to Csy surveillance complex with a 32nt spacer crRNA backbone region

PDB-5xlp:
Anti-CRISPR proteins AcrF1/2 bound to Csy surveillance complex with a 20nt spacer crRNA backbone region

PDB-6b7z:
Cryo-EM structure of human insulin degrading enzyme in complex with FAB H11 heavy chain and FAB H11 light chain

PDB-6bbp:
Model for compact volume of truncated monomeric Cytohesin-3 (Grp1; amino acids 63-399) E161A 6GS Arf6 Q67L fusion protein

PDB-6bbq:
Model for extended volume of truncated monomeric Cytohesin-3 (Grp1; amino acids 63-399) E161A Arf6 Q67L fusion protein

PDB-6bno:
Structure of bare actin filament

PDB-6bnp:
CryoEM structure of MyosinVI-actin complex in the rigor (nucleotide-free) state

PDB-6bnq:
CryoEM structure of Myosin VI-Actin complex in the ADP state

PDB-6bnu:
Structure of bare actin filament, backbone-averaged with sidechains truncated to alanine

PDB-6bnv:
CryoEM structure of MyosinVI-actin complex in the rigor (nucleotide-free) state, backbone-averaged with side chains truncated to alanine

PDB-6bnw:
CryoEM structure of Myosin VI-Actin complex in the ADP state, backbone-averaged with side chains truncated to alanine

PDB-6eit:
Coxsackievirus A24v in complex with the D1-D2 fragment of ICAM-1

EMDB-6845:
Flagellin derivative in complex with the NLR protein NAIP5

EMDB-8720:
VGSNKGAIIGL from Amyloid Beta determined by MicroED

PDB-5vos:
VGSNKGAIIGL from Amyloid Beta determined by MicroED

PDB-5yud:
Flagellin derivative in complex with the NLR protein NAIP5

EMDB-3689:
Full T5 tail containing pb2

EMDB-3690:
Empty T5 tail

EMDB-3691:
T5 pb6 tubes

EMDB-3692:
T5 tail - All data combined together

EMDB-3864:
Negative stain electron microscopy reconstruction of a cellulose secretion (Bcs) macrocomplex from E. coli

EMDB-3877:
Inner membrane Bcs complex (E. coli)

EMDB-3888:
State A (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes

EMDB-3889:
State B (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes

EMDB-3890:
State D (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes

EMDB-3891:
State E (TAP-Flag-Ytm1 E80A) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes

EMDB-3892:
State F (Rix1-TAP Rpf2-Flag) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes

EMDB-3893:
State C (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes

EMDB-3894:
S.aureus ClpC resting state, C2 symmetrised

EMDB-3895:
S.aureus ClpC resting state, asymmetric map

EMDB-3897:
Structure of S.aureus ClpC in complex with MecA

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Oct 4, 2017. Three pioneers of this field were awarded Nobel Prize in Chemistry 2017

Three pioneers of this field were awarded Nobel Prize in Chemistry 2017

  • Jacques Dubochet (University of Lausanne, Switzerland) is a pioneer of ice-embedding method of EM specimen (as known as cryo-EM), Most of 3DEM structures in EMDB and PDB are obtained using his method.
  • Joachim Frank (Columbia University, New York, USA) is a pioneer of single particle reconstruction, which is the most used reconstruction method for 3DEM structures in EMDB and EM entries in PDB. And also, he is a develper of Spider, which is one of the most famous software in this field, and is used for some EM Navigor data (e.g. map projection/slice images).
  • Richard Henderson (MRC Laboratory of Molecular Biology, Cambridge, UK) was determined the first biomolecule structure by EM. The first EM entry in PDB, PDB-1brd is determinedby him.

External links: The 2017 Nobel Prize in Chemistry - Press Release

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Major update of PDB

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External links: wwPDB Remediation / Enriched Model Files Conforming to OneDep Data Standards Now Available in the PDB FTP Archive

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Related info.: Changes in new EM Navigator and Yorodumi / EM Navigator (legacy version) / Yorodumi (legacy version)

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New EM Navigator & Yorodumi

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