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Showing 1 - 50 of 712 items for keywords: recombinant & proteins

EMDB-3870:
Cryo-electron tomogram of Ebola virus nucleoprotein, residues 1-450

EMDB-3872:
Cryo-electron tomogram of Ebola virus virus-like particles

EMDB-3873:
The structure of Ebola virus nucleocapsid from virions

EMDB-3874:
Cryo-electron tomogram of Ebola virus

EMDB-3875:
The structure of Marburg virus nucleocapsid from virions

EMDB-3876:
Cryo-electron tomogram of Marburg virus

PDB-6anu:
Cryo-EM structure of F-actin complexed with the beta-III-spectrin actin-binding domain

PDB-6bfu:
Glycan shield and fusion activation of a deltacoronavirus spike glycoprotein fine-tuned for enteric infections

PDB-5n9y:
The full-length structure of ZntB

PDB-5w68:
Type II secretin from Enteropathogenic Escherichia coli - GspD

PDB-6b5b:
Cryo-EM structure of the NAIP5-NLRC4-flagellin inflammasome

EMDB-3869:
The structure of Ebola virus nucleoprotein (residues 1-450) in nucleocapsid-like assemblies

EMDB-3871:
The structure of Ebola virus nucleocapsid-like assemblies from recombinant virus-like particles (nucleoprotein, VP24,VP35,VP40)

PDB-6ehl:
Model of the Ebola virus nucleoprotein in recombinant nucleocapsid-like assemblies

PDB-6ehm:
Model of the Ebola virus nucleocapsid subunit from recombinant virus-like particles

EMDB-3589:
Cryo-EM structure of tsA201 cell alpha1B and betaI and betaIVb microtubules

PDB-5n5n:
Cryo-EM structure of tsA201 cell alpha1B and betaI and betaIVb microtubules

PDB-5vt0:
Escherichia coli 6S RNA derivative in complex with Escherichia coli RNA polymerase sigma70-holoenzyme

EMDB-6829:
Cryo-EM Structure of CVA6 VLP

PDB-5wda:
Structure of the PulG pseudopilus

PDB-5wln:
Cryo-EM structure of the T2SS secretin XcpQ from Pseudomonas aeruginosa

PDB-5yhq:
Cryo-EM Structure of CVA6 VLP

PDB-6b7n:
Cryo-electron microscopy structure of porcine delta coronavirus spike protein in the pre-fusion state

PDB-6b0x:
Capsid protein and C-terminal part of scaffolding protein in the Staphylococcus aureus phage 80alpha procapsid

PDB-6b23:
Capsid protein and C-terminal part of CpmB protein in the Staphylococcus aureus pathogenicity island 1 80alpha-derived procapsid

PDB-6b44:
Cryo-EM structure of Type I-F CRISPR crRNA-guided Csy surveillance complex with bound target dsDNA

PDB-6b45:
Cryo-EM structure of Type I-F CRISPR crRNA-guided Csy surveillance complex

PDB-6b46:
Cryo-EM structure of Type I-F CRISPR crRNA-guided Csy surveillance complex with bound anti-CRISPR protein AcrF1

PDB-6b47:
Cryo-EM structure of Type I-F CRISPR crRNA-guided Csy surveillance complex with bound anti-CRISPR protein AcrF2

PDB-6b48:
Cryo-EM structure of Type I-F CRISPR crRNA-guided Csy surveillance complex with bound anti-CRISPR protein AcrF10

PDB-5m50:
Mechanism of microtubule minus-end recognition and protection by CAMSAP proteins

PDB-5m54:
Mechanism of microtubule minus-end recognition and protection by CAMSAP proteins

PDB-5m5c:
Mechanism of microtubule minus-end recognition and protection by CAMSAP proteins

PDB-5owx:
Inside-out FMDV A10 capsid

PDB-5oyi:
FMDV A10 dissociated pentamer

PDB-5oik:
Structure of an RNA polymerase II-DSIF transcription elongation complex

PDB-5xwy:
Electron cryo-microscopy structure of LbuCas13a-crRNA binary complex

PDB-5vh9:
Cryo-EM structure of yeast cytoplasmic dynein-1 with Lis1 and ATP

PDB-5vlj:
Cryo-EM structure of yeast cytoplasmic dynein with Walker B mutation at AAA3 in presence of ATP-VO4

EMDB-3810:
Tomogram of e. coli carrying empty ple6 plasmid induced with 20 uM IPTG

EMDB-3811:
Tomogram of e.coli carrying the ple7 plasmid carrying YFP-MreB induced with 20 uM IPTG

EMDB-3812:
Tomogram of e. coli carrying the ple7 plasmid carrying YFP-MreB hyper-overexpressed by induction with 1uM IPTG

PDB-5vgz:
Conformational Landscape of the p28-Bound Human Proteasome Regulatory Particle

PDB-5vhf:
Conformational Landscape of the p28-Bound Human Proteasome Regulatory Particle

PDB-5vhh:
Conformational Landscape of the p28-Bound Human Proteasome Regulatory Particle

PDB-5vhi:
Conformational Landscape of the p28-Bound Human Proteasome Regulatory Particle

PDB-5vhj:
Conformational Landscape of the p28-Bound Human Proteasome Regulatory Particle

PDB-5vhm:
Conformational Landscape of the p28-Bound Human Proteasome Regulatory Particle

PDB-5vhn:
Conformational Landscape of the p28-Bound Human Proteasome Regulatory Particle

PDB-5vho:
Conformational Landscape of the p28-Bound Human Proteasome Regulatory Particle

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Oct 4, 2017. Three pioneers of this field were awarded Nobel Prize in Chemistry 2017

Three pioneers of this field were awarded Nobel Prize in Chemistry 2017

  • Jacques Dubochet (University of Lausanne, Switzerland) is a pioneer of ice-embedding method of EM specimen (as known as cryo-EM), Most of 3DEM structures in EMDB and PDB are obtained using his method.
  • Joachim Frank (Columbia University, New York, USA) is a pioneer of single particle reconstruction, which is the most used reconstruction method for 3DEM structures in EMDB and EM entries in PDB. And also, he is a develper of Spider, which is one of the most famous software in this field, and is used for some EM Navigor data (e.g. map projection/slice images).
  • Richard Henderson (MRC Laboratory of Molecular Biology, Cambridge, UK) was determined the first biomolecule structure by EM. The first EM entry in PDB, PDB-1brd is determinedby him.

External links: The 2017 Nobel Prize in Chemistry - Press Release

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Jul 12, 2017. Major update of PDB

Major update of PDB

  • wwPDB released updated PDB data conforming to the new PDBx/mmCIF dictionary. This is a major update changing the version number from 4 to 5, and with Remediation, in which all the entries are updated. See below links for details.
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External links: wwPDB Remediation / Enriched Model Files Conforming to OneDep Data Standards Now Available in the PDB FTP Archive

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Related info.: Changes in new EM Navigator and Yorodumi / EM Navigator (legacy version) / Yorodumi (legacy version)

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Aug 31, 2016. New EM Navigator & Yorodumi

New EM Navigator & Yorodumi

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  • Current version will continue as 'legacy version' for some time.

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