[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database
Q: What is the data source of EM Navigator?
Latest entriesEMDB:
PDB:
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Displayentries / page
Entry
Article
Sample
Experiment
Processing

Yorodumi Search

-
Search result

Showing 1 - 50 of 6,455 items (all data)

EMDB-3452:
native 40S-ABCE1 complex
Method: single particle / : Heuer A, Beckmann R, Tampe R

EMDB-3604:
Structure of the C. crescentus S-layer
Method: subtomogram averaging / : Bharat TA, Hagen WJ

EMDB-3636:
multi-drug efflux; membrane transport; RND superfamily; Drug resistance
Method: single particle / : Wang Z, Fan G

EMDB-6699:
Complex of Snf2-Nucleosome complex with Snf2 bound to position +6 of the nucleosome
Method: single particle / : Li M, Liu X, Xia X, Cheng Z, Li X

EMDB-6700:
Complex of Snf2-Nucleosome complex with Snf2 bound to SHL2 of the nucleosome
Method: single particle / : Li M, Liu X, Xia X, Cheng Z, Li X

EMDB-8621:
The cryo-EM structure of YjeQ bound to the 30S subunit suggests a fidelity checkpoint function for this protein in ribosome assembly
Method: single particle / : Razi A, Guarne A

EMDB-8626:
Structure of the 30S subunit
Method: single particle / : Razi A, Guarne A, Ortega J

EMDB-8627:
Structure of the 30S subunit, subclass I
Method: single particle / : Razi A, Guarne A, Ortega J

EMDB-8628:
Structure of the 30S subunit, subclass II
Method: single particle / : Razi A, Guarne A, Ortega J

EMDB-8636:
multi-drug efflux; membrane transport; RND superfamily; Drug resistance
Method: single particle / : wang Z, fan G

PDB-5n97:
Structure of the C. crescentus S-layer
Method: subtomogram averaging / : Bharat TA, Hagen WJ, Briggs JA, Lowe J

PDB-5ng5:
multi-drug efflux; membrane transport; RND superfamily; Drug resistance
Method: single particle / : Wang Z, Fan G, Hryc CF, Blaza JN, Serysheva II, Schmid MF, Chiu W, Luisi BF, Du D

PDB-5uz4:
The cryo-EM structure of YjeQ bound to the 30S subunit suggests a fidelity checkpoint function for this protein in ribosome assembly
Method: single particle / : Razi A, Guarne A, Ortega J

PDB-5v5s:
multi-drug efflux; membrane transport; RND superfamily; Drug resistance
Method: single particle / : wang Z, fan G, Hryc CF, Blaza JN, Serysheva II, Schmid MF, Chiu W, Luisi BF, Du D

PDB-5x0x:
Complex of Snf2-Nucleosome complex with Snf2 bound to position +6 of the nucleosome
Method: single particle / : Li M, Liu X, Xia X, Chen Z, Li X

PDB-5x0y:
Complex of Snf2-Nucleosome complex with Snf2 bound to SHL2 of the nucleosome
Method: single particle / : Li M, Liu X, Xia X, Chen Z, Li X

EMDB-3594:
RNA polymerase I initially transcribing complex with visible tandem Winged Helix domain
Method: single particle / : Engel C, Gubbey T, Neyer S, Sainsbury S, Oberthuer C, Baejen C, Bernecky C, Cramer P

EMDB-3595:
Retinoschisin R141H Mutant
Method: single particle / : Ramsay EP, Collins RF, Owens TW, Siebert CA, Jones RPO, Roseman A, Wang T, Baldock C

EMDB-3596:
The structure of the ESX-5 mycobacterial type VII secretion system membrane complex
Method: single particle / : Ciccarelli L, Marlovits TC

EMDB-3603:
KaiCB circadian clock backbone model based on a Cryo-EM density
Method: single particle / : Schuller JM, Snijder J, Loessl P, Heck AJR, Foerster F

EMDB-3642:
Full-length complex of CMG helicase with polymerase epsilon
Method: single particle / : Zhou JC, Janska A, Goswami P, Renault L, Abid Ali F, Kotecha A, Diffley JFX, Costa A

EMDB-3643:
Complex of CMG helicase with polymerase epsilon lacking the catalytic domain of Pol2
Method: single particle / : Zhou JC, Janska A, Goswami P, Renault L, Abid Ali F, Kotecha A, Diffley JFX, Costa A

EMDB-3644:
Full-length CMG helicase complex
Method: single particle / : Zhou JC, Janska A, Goswami P, Renault L, Abid Ali F, Kotecha A, Diffley JFX, Costa A

EMDB-4119:
In situ TPPII 36mer
Method: subtomogram averaging / : Fukuda Y, Beck F, Baumeister W

EMDB-4120:
In situ TPPII 32mer
Method: subtomogram averaging / : Fukuda Y, Beck F, Baumeister W

EMDB-6715:
FliF ring of Salmonella flagellar motor
Method: single particle / : Suzuki H, Yonekura K, Namba K

EMDB-6716:
Ring assembly of FliF-FliG fusion protein
Method: single particle / : Suzuki H, Yonekura K, Namba K

EMDB-8549:
Vps4-Vta1 complex
Method: single particle / : Monroe N, Shen P

EMDB-8550:
Vps4-Vta1 complex, sharpened map
Method: single particle / : Monroe N, Shen P, Han H, Sundquist WI, Hill CP

EMDB-8551:
Vps4-HCP hexamer
Method: single particle / : Monroe N, Shen P, Han H, Sundquist WI, Hill CP

EMDB-8552:
Vps4-Vta1 complex, VSL_A
Method: single particle / : Monroe N, Shen P, Han H, Sundquist WI, Hill CP

EMDB-8553:
Vps4-Vta1 complex, VSL_B
Method: single particle / : Monroe N, Shen P, Han H, Sundquist WI, Hill CP

EMDB-8554:
Vps4-Vta1 complex, VSL_C
Method: single particle / : Monroe N, Shen P, Han H, Sundquist WI, Hill CP

EMDB-8555:
Vps4-Vta1 complex, VSL_D
Method: single particle / : Monroe N, Shen P, Han H, Sundquist WI, Hill CP

EMDB-8556:
Vps4-Vta1 complex, VSL_E
Method: single particle / : Monroe N, Shen P, Han H, Sundquist WI, Hill CP

EMDB-8557:
Vps4-Vta1 complex, VSL_F
Method: single particle / : Monroe N, Shen P, Han H, Sundquist WI, Hill CP

EMDB-8570:
Vps4-Vta1 complex, State 3 of subunitF
Method: single particle / : Monroe N, Shen P, Han H, Sundquist WI, Hill CP

EMDB-8571:
Vps4-Vta1 complex, State 2 of subunitF
Method: single particle / : Monroe N, Shen P, Han H, Sundquist WI, Hill CP

EMDB-8572:
Vps4-Vta1 complex, State 1 of subunitF
Method: single particle / : Monroe N, Shen P, Han H, Sundquist WI, Hill CP

EMDB-8608:
Structure of E. coli MCE protein PqiB, periplasmic domain
Method: single particle / : Bhabha G, Ekiert DC

EMDB-8609:
Cleaved Cowpea Mosaic Virus (CPMV) eVLP structure refined from a small subset of data from the cryo-EM reconstruction of uncleaved eVLP reported previously
Method: icosahedral / : Hesketh EL, Thompson RF, Ranson NA

EMDB-8610:
Structure of E. coli MCE protein PqiB, periplasmic domain
Method: single particle / : Bhabha G, Ekiert DC

EMDB-8611:
Negative stain reconstruction of E. coli MCE protein YebT
Method: single particle / : Bhabha G, Ekiert DC

EMDB-8612:
Negative stain reconstruction of E. coli MCE protein PqiB
Method: single particle / : Bhabha G, Ekiert DC

EMDB-8632:
CryoEM Structure of a Prokaryotic Cyclic Nucleotide-Gated Ion Channel
Method: single particle / : James ZM, Borst AJ

EMDB-8633:
CryoEM Structure of a Prokaryotic Cyclic Nucleotide-Gated Ion Channel
Method: single particle / : James ZM, Borst AJ

EMDB-9534:
Architecture of mammalian respirasome
Method: single particle / : Gu J, Wu M

PDB-5ll6:
Structure of the 40S ABCE1 post-splitting complex in ribosome recycling and translation initiation
Method: single particle / : Heuer A, Gerovac M, Schmidt C, Trowitzsch S, Preis A, Koetter P, Berninghausen O, Becker T, Beckmann R, Tampe R

PDB-5n6w:
Retinoschisin R141H Mutant
Method: single particle / : Ramsay EP, Collins RF, Owens TW, Siebert CA, Jones RPO, Roseman A, Wang T, Baldock C

PDB-5ni1:
CryoEM structure of haemoglobin at 3.2 A determined with the Volta phase plate
Method: single particle / : Khoshouei M, Radjainia M, Bunker R, Baumeister W, Danev R

Pages:

+
About EMN search

-
News

-
Sep 15, 2016. EM Navigator & Yorodumi renewed

EM Navigator & Yorodumi renewed

  • New versions of EM Navigator and Yorodumi started

Related info.: Changes in new EM Navigator and Yorodumi / EM Navigator (legacy version) / Yorodumi (legacy version)

-
Aug 31, 2016. New EM Navigator & Yorodumi

New EM Navigator & Yorodumi

  • In 15th Sep 2016, the development versions of EM Navigator and Yorodumi will replace the official versions.
  • Current version will continue as 'legacy version' for some time.

Related info.: Changes in new EM Navigator and Yorodumi / EM Navigator / Yorodumi / EM Navigator (legacy version) / Yorodumi (legacy version)

+
Apr 13, 2016. Omokage search got faster

Omokage search got faster

  • The computation time became ~1/2 compared to the previous version by re-optimization of data accession
  • Enjoy "shape similarity" of biomolecules, more!

Related info.: Omokage search

+
Mar 3, 2016. Presentation (PDF format) at IPR seminar on Feb 19.

+
Dec 4, 2015. The article about Omokage search is published online

The article about Omokage search is published online

Related info.: Omokage search / gmfit

Read more

-
EMN Search

3DEM data search

  • Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.: EMDB / PDB / EM Navigator / Q: What is the data source of EM Navigator? / Yorodumi Search

Read more