[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database
Q: What is the data source of EM Navigator?
Latest entriesEMDB:
PDB:
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Displayentries / page
Entry
Article
Sample
Experiment
Processing

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,544 items for database: PDB

PDB-5n97:
Structure of the C. crescentus S-layer

PDB-5ng5:
multi-drug efflux; membrane transport; RND superfamily; Drug resistance

PDB-5uz4:
The cryo-EM structure of YjeQ bound to the 30S subunit suggests a fidelity checkpoint function for this protein in ribosome assembly

PDB-5v5s:
multi-drug efflux; membrane transport; RND superfamily; Drug resistance

PDB-5x0x:
Complex of Snf2-Nucleosome complex with Snf2 bound to position +6 of the nucleosome

PDB-5x0y:
Complex of Snf2-Nucleosome complex with Snf2 bound to SHL2 of the nucleosome

PDB-5ll6:
Structure of the 40S ABCE1 post-splitting complex in ribosome recycling and translation initiation

PDB-5n6w:
Retinoschisin R141H Mutant

PDB-5ni1:
CryoEM structure of haemoglobin at 3.2 A determined with the Volta phase plate

PDB-5uie:
Vps4-Vta1 complex

PDB-5uvn:
Structure of E. coli MCE protein PqiB, periplasmic domain

PDB-5v4s:
CryoEM Structure of a Prokaryotic Cyclic Nucleotide-Gated Ion Channel

PDB-5gpn:
Architecture of mammalian respirasome

PDB-5k7n:
MicroED structure of tau VQIVYK peptide at 1.1 A resolution

PDB-5k7o:
MicroED structure of lysozyme at 1.8 A resolution

PDB-5k7p:
MicroED structure of xylanase at 2.3 A resolution

PDB-5k7q:
MicroED structure of thaumatin at 2.5 A resolution

PDB-5k7r:
MicroED structure of trypsin at 1.7 A resolution

PDB-5k7s:
MicroED structure of proteinase K at 1.6 A resolution

PDB-5k7t:
MicroED structure of thermolysin at 2.5 A resolution

PDB-5ly6:
CryoEM structure of the membrane pore complex of Pneumolysin at 4.5A

PDB-5mup:
Structure of deformed wing virus, a honeybee pathogen

PDB-5mv5:
Structure of deformed wing virus, a honeybee pathogen

PDB-5mv6:
Structure of deformed wing virus, a honeybee pathogen

PDB-5n5y:
Cryo-EM structure of RNA polymerase I in complex with Rrn3 and Core Factor (Orientation III)

PDB-5n5z:
Cryo-EM structure of RNA polymerase I in complex with Rrn3 and Core Factor (Orientation II)

PDB-5n60:
Cryo-EM structure of RNA polymerase I in complex with Rrn3 and Core Factor (Orientation I)

PDB-5n61:
RNA polymerase I initially transcribing complex

PDB-5nbz:
Wzz dodecamer fitted by MDFF to the Wzz experimental map from cryo-EM

PDB-5upa:
CryoEM structure of crosslinked E.coli RNA polymerase elongation complex

PDB-5gup:
Cryo-EM structure of mammalian respiratory supercomplex I1III2IV1

PDB-5l7q:
Structure of deformed wing virus, a honeybee pathogen

PDB-5l8q:
Structure of deformed wing virus, a honeybee pathogen

PDB-5mb8:
Hsp21 dodecamer, structural model based on cryo-EM and homology modelling

PDB-5n8y:
KaiCBA circadian clock backbone model based on a Cryo-EM density

PDB-5uhy:
A Human Antibody Against Zika Virus Crosslinks the E Protein to Prevent Infection

PDB-5up6:
CryoEM structure of HK022 Nun - E.coli RNA polymerase elongation complex

PDB-5upc:
CryoEM structure of E.coli RNA polymerase elongation complex

PDB-5urf:
The structure of human bocavirus 1

PDB-5us7:
Human bocavirus 3

PDB-5us9:
Human bocavirus 4

PDB-5wyj:
Cryo-EM structure of the 90S small subunit pre-ribosome (Dhr1-depleted, Enp1-TAP, state 1)

PDB-5wyk:
Cryo-EM structure of the 90S small subunit pre-ribosome (Mtr4-depleted, Enp1-TAP)

PDB-5l35:
Cryo-EM structure of bacteriophage Sf6 at 2.9 Angstrom resolution

PDB-5lmx:
Monomeric RNA polymerase I at 4.9 A resolution

PDB-5ln3:
The human 26S Proteasome at 6.8 Ang.

PDB-5mpp:
Structure of AaLS-wt

PDB-5mq3:
Structure of AaLS-neg

PDB-5mq7:
Structure of AaLS-13

PDB-5mqf:
Cryo-EM structure of a human spliceosome activated for step 2 of splicing (C* complex)

Pages:

+
About EMN search

-
News

-
Sep 15, 2016. EM Navigator & Yorodumi renewed

EM Navigator & Yorodumi renewed

  • New versions of EM Navigator and Yorodumi started

Related info.: Changes in new EM Navigator and Yorodumi / EM Navigator (legacy version) / Yorodumi (legacy version)

-
Aug 31, 2016. New EM Navigator & Yorodumi

New EM Navigator & Yorodumi

  • In 15th Sep 2016, the development versions of EM Navigator and Yorodumi will replace the official versions.
  • Current version will continue as 'legacy version' for some time.

Related info.: Changes in new EM Navigator and Yorodumi / EM Navigator / Yorodumi / EM Navigator (legacy version) / Yorodumi (legacy version)

+
Apr 13, 2016. Omokage search got faster

Omokage search got faster

  • The computation time became ~1/2 compared to the previous version by re-optimization of data accession
  • Enjoy "shape similarity" of biomolecules, more!

Related info.: Omokage search

+
Mar 3, 2016. Presentation (PDF format) at IPR seminar on Feb 19.

+
Dec 4, 2015. The article about Omokage search is published online

The article about Omokage search is published online

Related info.: Omokage search / gmfit

Read more

-
EMN Search

3DEM data search

  • Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.: EMDB / PDB / EM Navigator / Q: What is the data source of EM Navigator? / Yorodumi Search

Read more