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Showing 1 - 50 of 64 items for author: y. & liu

PDB-5xwy:
Electron cryo-microscopy structure of LbuCas13a-crRNA binary complex
Method: single particle / : Zhang X, Wang Y, Ma J, Liu L, Li X, Li Z, You L, Wang J, Wang M

PDB-5y3r:
Cryo-EM structure of Human DNA-PK Holoenzyme
Method: single particle / : Yin X, Liu M, Tian Y, Wang J, Xu Y

PDB-5w3e:
CryoEM structure of rhinovirus B14 in complex with C5 Fab (33 degrees Celsius, molar ratio 1:3, full particle)
Method: single particle / : Liu Y, Dong Y, Rossmann MG

PDB-5w3l:
CryoEM structure of rhinovirus B14 in complex with C5 Fab (4 degrees Celsius, molar ratio 1:3, full particle)
Method: single particle / : Liu Y, Dong Y, Rossmann MG

PDB-5w3m:
CryoEM structure of rhinovirus B14 in complex with C5 Fab (33 degrees Celsius, molar ratio 1:1, full particle)
Method: single particle / : Liu Y, Dong Y, Rossmann MG

PDB-5w3o:
CryoEM structure of rhinovirus B14 in complex with C5 Fab (33 degrees Celsius, molar ratio 1:3, empty particle)
Method: single particle / : Liu Y, Dong Y, Rossmann MG

PDB-5ujz:
CryoEM structure of an influenza virus receptor-binding site antibody-antigen interface - Class 1
Method: single particle / : Liu Y, Pan J, Caradonna T, Jenni S, Raymond DD, Schmidt AG, Harrison SC, Grigorieff N

PDB-5uk0:
CryoEM structure of an influenza virus receptor-binding site antibody-antigen interface - Class 2
Method: single particle / : Liu Y, Pan J, Caradonna T, Jenni S, Raymond DD, Schmidt AG, Harrison SC, Grigorieff N

PDB-5uk1:
CryoEM structure of an influenza virus receptor-binding site antibody-antigen interface - Class 3
Method: single particle / : Liu Y, Pan J, Caradonna T, Jenni S, Raymond DD, Schmidt AG, Harrison SC, Grigorieff N

PDB-5uk2:
CryoEM structure of an influenza virus receptor-binding site antibody-antigen interface - Class 4
Method: single particle / : Liu Y, Pan J, Caradonna T, Jenni S, Raymond DD, Schmidt AG, Harrison SC, Grigorieff N

PDB-5h64:
Cryo-EM structure of mTORC1
Method: single particle / : Yang H, Wang J, Liu M, Chen X, Huang M, Tan D, Dong M, Wong CCL, Wang J, Xu Y, Wang H

PDB-5gzr:
Zika virus E protein complexed with a neutralizing antibody Z23-Fab
Method: single particle / : Gao GG, Shi Y, Peng R, Liu S

PDB-3jbz:
Crystal structure of mTOR docked into EM map of dimeric ATM kinase
Method: single particle / : Lau WCY

PDB-5fwp:
Atomic cryoEM structure of Hsp90-Cdc37-Cdk4 complex
Method: single particle / : Verba KA, Wang RYR, Arakawa A, Liu Y, Yokoyama S, Agard DA

PDB-5gw4:
Structure of Yeast NPP-TRiC
Method: single particle / : Zang Y, Jin M, Wang H, Cong Y

PDB-5gw5:
Structure of TRiC-AMP-PNP
Method: single particle / : Zang Y, Jin M, Wang H, Cong Y

PDB-5jzc:
helical filament
Method: helical / : Short J, Liu Y

PDB-5jzg:
CryoEM structure of the native empty particle of a human rhinovirus C
Method: single particle / : Liu Y, Hill MG, Klose T, Chen Z, Watters KE, Jiang W, Palmenberg AC, Rossmann MG

PDB-5k0u:
CryoEM structure of the full virion of a human rhinovirus C
Method: single particle / : Liu Y, Hill MG, Klose T, Chen Z, Watters KE, Jiang W, Palmenberg AC, Rossmann MG

PDB-5fwk:
Atomic cryoEM structure of Hsp90-Cdc37-Cdk4 complex
Method: single particle / : Verba KA, Wang RYR, Arakawa A, Liu Y, Yokoyama S, Agard DA

PDB-5fwl:
Atomic cryoEM structure of Hsp90-Cdc37-Cdk4 complex
Method: single particle / : Verba KA, Wang RYR, Arakawa A, Liu Y, Yokoyama S, Agard DA

PDB-5fwm:
Atomic cryoEM structure of Hsp90-Cdc37-Cdk4 complex
Method: single particle / : Verba KA, Wang RYR, Arakawa A, Liu Y, Yokoyama S, Agard DA

PDB-5g06:
Cryo-EM structure of yeast cytoplasmic exosome
Method: single particle / : Liu JJ, Niu CY, Wu Y, Tan D, Wang Y, Ye MD, Liu Y, Zhao WW, Zhou K, Liu QS, Dai JB, Yang XR, Dong MQ, Huang N, Wang HW

PDB-3jcu:
Cryo-EM structure of spinach PSII-LHCII supercomplex at 3.2 Angstrom resolution
Method: single particle / : Wei XP, Zhang XZ, Su XD, Cao P, Liu XY, Li M, Chang WR, Liu ZF

PDB-5irx:
Structure of TRPV1 in complex with DkTx and RTX, determined in lipid nanodisc
Method: single particle / : Gao Y, Cao E, Julius D, Cheng Y

PDB-5irz:
Structure of TRPV1 determined in lipid nanodisc
Method: single particle / : Gao Y, Cao E, Julius D, Cheng Y

PDB-5is0:
Structure of TRPV1 in complex with capsazepine, determined in lipid nanodisc
Method: single particle / : Gao Y, Cao E, Julius D, Cheng Y

PDB-3jau:
The cryoEM map of EV71 mature viron in complex with the Fab fragment of antibody D5
Method: single particle / : Fan C, Ye XH, Ku ZQ, Zuo T, Kong LL, Zhang C, Shi JP, Liu QW, Chen T, Zhang YY, Jiang W, Zhang LQ, Huang Z, Cong Y

PDB-3jcd:
Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)
Method: single particle / : Zhang D, Yan K, Liu G, Song G, Luo J, Shi Y, Cheng E, Wu S, Jiang T, Low J, Gao N, Qin Y

PDB-3jce:
Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)
Method: single particle / : Zhang D, Yan K, Liu G, Song G, Luo J, Shi Y, Cheng E, Wu S, Jiang T, Low J, Gao N, Qin Y

PDB-5an8:
Cryo-electron microscopy structure of rabbit TRPV2 ion channel
Method: single particle / : Zubcevic L, Herzik MAJ, Chung BC, Lander GC, Lee SY

PDB-3j9p:
Structure of the TRPA1 ion channel determined by electron cryo-microscopy
Method: single particle / : Paulsen CE, Armache JP, Gao Y, Cheng Y, Julius D

PDB-3j9b:
Electron cryo-microscopy of an RNA polymerase
Method: single particle / : Chang SH, Sun DP, Liang HH, Wang J, Li J, Guo L, Wang XL, Guan CC, Boruah BM, Yuan LM, Feng F, Yang MR, Wojdyla J, Wang JW, Wang MT, Wang HW, Liu YF

PDB-3j8g:
Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit
Method: single particle / : Zhang X, Yan K, Zhang Y, Li N, Ma C, Li Z, Zhang Y, Feng B, Liu J, Sun Y, Xu Y, Lei J, Gao N

PDB-3j7v:
Capsid Expansion Mechanism Of Bacteriophage T7 Revealed By Multi-State Atomic Models Derived From Cryo-EM Reconstructions
Method: single particle / : Guo F, Liu Z, Fang PA, Zhang Q, Wright ET, Wu W, Zhang C, Vago F, Ren Y, Jakata J, Chiu W, Serwer P, Jiang W

PDB-3j7w:
Capsid Expansion Mechanism Of Bacteriophage T7 Revealed By Multi-State Atomic Models Derived From Cryo-EM Reconstructions
Method: single particle / : Guo F, Liu Z, Fang PA, Zhang Q, Wright ET, Wu W, Zhang C, Vago F, Ren Y, Jakata J, Chiu W, Serwer P, Jiang W

PDB-3j7x:
Capsid Expansion Mechanism Of Bacteriophage T7 Revealed By Multi-State Atomic Models Derived From Cryo-EM Reconstructions
Method: single particle / : Guo F, Liu Z, Fang PA, Zhang Q, Wright ET, Wu W, Zhang C, Vago F, Ren Y, Jakata J, Chiu W, Serwer P, Jiang W

PDB-4v6v:
Tetracycline resistance protein Tet(O) bound to the ribosome
Method: single particle / : Li W, Atkinson GC, Thakor NS, Allas U, Lu C, Chan KY, Tenson T, Schulten K, Wilson KS, Hauryliuk V, Frank J

PDB-3zif:
Cryo-EM structures of two intermediates provide insight into adenovirus assembly and disassembly
Method: single particle / : Cheng L, Huang X, Li X, Xiong W, Sun W, Yang C, Zhang K, Wang Y, Liu H, Ji G, Sun F, Zheng C, Zhu P

PDB-3j5p:
Structure of TRPV1 ion channel determined by single particle electron cryo-microscopy
Method: single particle / : Liao M, Cao E, Julius D, Cheng Y

PDB-3j5q:
Structure of TRPV1 ion channel in complex with DkTx and RTX determined by single particle electron cryo-microscopy
Method: single particle / : Liao M, Cao E, Julius D, Cheng Y

PDB-3j5r:
Reconstruction of TRPV1 ion channel in complex with capsaicin by single particle cryo-microscopy
Method: single particle / : Liao M, Cao E, Julius D, Cheng Y

PDB-3j1b:
Cryo-EM structure of 8-fold symmetric rATcpn-alpha in apo state
Method: single particle / : Zhang K, Wang L, Liu YX, Wang X, Gao B, Hu ZJ, Ji G, Chan KY, Schulten K, Dong ZY, Sun F

PDB-3j1c:
Cryo-EM structure of 9-fold symmetric rATcpn-alpha in apo state
Method: single particle / : Zhang K, Wang L, Liu YX, Wang X, Gao B, Hu ZJ, Ji G, Chan KY, Schulten K, Dong ZY, Sun F

PDB-3j1e:
Cryo-EM structure of 9-fold symmetric rATcpn-beta in apo state
Method: single particle / : Zhang K, Wang L, Liu YX, Wang X, Gao B, Hu ZJ, Ji G, Chan KY, Schulten K, Dong ZY, Sun F

PDB-3j1f:
Cryo-EM structure of 9-fold symmetric rATcpn-beta in ATP-binding state
Method: single particle / : Zhang K, Wang L, Liu YX, Wang X, Gao B, Hu ZJ, Ji G, Chan KY, Schulten K, Dong ZY, Sun F

PDB-3j3r:
Structural dynamics of the MecA-ClpC complex revealed by cryo-EM
Method: single particle / : Liu J, Mei Z, Li N, Qi Y, Xu Y, Shi Y, Wang F, Lei J, Gao N

PDB-3j3s:
Structural dynamics of the MecA-ClpC complex revealed by cryo-EM
Method: single particle / : Liu J, Mei Z, Li N, Qi Y, Xu Y, Shi Y, Wang F, Lei J, Gao N

PDB-3j3t:
Structural dynamics of the MecA-ClpC complex revealed by cryo-EM
Method: single particle / : Liu J, Mei Z, Li N, Qi Y, Xu Y, Shi Y, Wang F, Lei J, Gao N

PDB-3j3u:
Structural dynamics of the MecA-ClpC complex revealed by cryo-EM
Method: single particle / : Liu J, Mei Z, Li N, Qi Y, Xu Y, Shi Y, Wang F, Lei J, Gao N

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Oct 4, 2017. Three pioneers of this field were awarded Nobel Prize in Chemistry 2017

Three pioneers of this field were awarded Nobel Prize in Chemistry 2017

  • Jacques Dubochet (University of Lausanne, Switzerland) is a pioneer of ice-embedding method of EM specimen (as known as cryo-EM), Most of 3DEM structures in EMDB and PDB are obtained using his method.
  • Joachim Frank (Columbia University, New York, USA) is a pioneer of single particle reconstruction, which is the most used reconstruction method for 3DEM structures in EMDB and EM entries in PDB. And also, he is a develper of Spider, which is one of the most famous software in this field, and is used for some EM Navigor data (e.g. map projection/slice images).
  • Richard Henderson (MRC Laboratory of Molecular Biology, Cambridge, UK) was determined the first biomolecule structure by EM. The first EM entry in PDB, PDB-1brd is determinedby him.

External links: The 2017 Nobel Prize in Chemistry - Press Release

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Major update of PDB

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Related info.: Changes in new EM Navigator and Yorodumi / EM Navigator (legacy version) / Yorodumi (legacy version)

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