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Showing 1 - 50 of 55 items for author: m. & dong

PDB-5xs4:
Structure of Coxsackievirus A6 (CVA6) virus A-particle
Method: single particle / : Zheng QB, He MZ, Xu LF, Yu H, Li SW, Cheng T

PDB-5xs5:
Structure of Coxsackievirus A6 (CVA6) virus procapsid particle
Method: single particle / : Zheng QB, He MZ, Xu LF, Yu H, Cheng T, Li SW

PDB-5xs7:
Structure of Coxsackievirus A6 (CVA6) virus A-particle in complex with the neutralizing antibody fragment 1D5
Method: single particle / : Zheng QB, He MZ, Xu LF, Yu H, Li SW, Cheng T

PDB-5xnl:
Structure of stacked C2S2M2-type PSII-LHCII supercomplex from Pisum sativum
Method: single particle / : Su XD, Ma J, Wei XP, Cao P, Zhu DJ, Chang WR, Liu ZF, Zhang XZ, Li M

PDB-5xnm:
Structure of unstacked C2S2M2-type PSII-LHCII supercomplex from Pisum sativum
Method: single particle / : Su XD, Ma J, Wei XP, Cao P, Zhu DJ, Chang WR, Liu ZF, Zhang XZ, Li M

PDB-5xnn:
Structure of M-LHCII and CP24 complexes in the stacked C2S2M2-type PSII-LHCII supercomplex from Pisum sativum
Method: single particle / : Su XD, Ma J, Wei XP, Cao P, Zhu DJ, Chang WR, Liu ZF, Zhang XZ, Li M

PDB-5xno:
Structure of M-LHCII and CP24 complexes in the unstacked C2S2M2-type PSII-LHCII supercomplex from Pisum sativum
Method: single particle / : Su XD, Ma J, Wei XP, Cao P, Zhu DJ, Chang WR, Liu ZF, Zhang XZ, Li M

PDB-5vgz:
Conformational Landscape of the p28-Bound Human Proteasome Regulatory Particle
Method: single particle / : Lu Y, Wu J, Dong Y, Chen S, Sun S, Ma YB, Ouyang Q, Finley D, Kirschner MW, Mao Y

PDB-5vhf:
Conformational Landscape of the p28-Bound Human Proteasome Regulatory Particle
Method: single particle / : Lu Y, Wu J, Dong Y, Chen S, Sun S, Ma YB, Ouyang Q, Finley D, Kirschner MW, Mao Y

PDB-5vhh:
Conformational Landscape of the p28-Bound Human Proteasome Regulatory Particle
Method: single particle / : Lu Y, Wu J, Dong Y, Chen S, Sun S, Ma YB, Ouyang Q, Finley D, Kirschner MW, Mao Y

PDB-5vhi:
Conformational Landscape of the p28-Bound Human Proteasome Regulatory Particle
Method: single particle / : Lu Y, Wu J, Dong Y, Chen S, Sun S, Ma YB, Ouyang Q, Finley D, Kirschner MW, Mao Y

PDB-5vhj:
Conformational Landscape of the p28-Bound Human Proteasome Regulatory Particle
Method: single particle / : Lu Y, Wu J, Dong Y, Chen S, Sun S, Ma YB, Ouyang Q, Finley D, Kirschner MW, Mao Y

PDB-5vhm:
Conformational Landscape of the p28-Bound Human Proteasome Regulatory Particle
Method: single particle / : Lu Y, Wu J, Dong Y, Chen S, Sun S, Ma YB, Ouyang Q, Finley D, Kirschner MW, Mao Y

PDB-5vhn:
Conformational Landscape of the p28-Bound Human Proteasome Regulatory Particle
Method: single particle / : Lu Y, Wu J, Dong Y, Chen S, Sun S, Ma YB, Ouyang Q, Finley D, Kirschner MW, Mao Y

PDB-5vho:
Conformational Landscape of the p28-Bound Human Proteasome Regulatory Particle
Method: single particle / : Lu Y, Wu J, Dong Y, Chen S, Sun S, Ma YB, Ouyang Q, Finley D, Kirschner MW, Mao Y

PDB-5vhp:
Conformational Landscape of the p28-Bound Human Proteasome Regulatory Particle
Method: single particle / : Lu Y, Wu J, Dong Y, Chen S, Sun S, Ma YB, Ouyang Q, Finley D, Kirschner MW, Mao Y

PDB-5vhq:
Conformational Landscape of the p28-Bound Human Proteasome Regulatory Particle
Method: single particle / : Lu Y, Wu J, Dong Y, Chen S, Sun S, Ma YB, Ouyang Q, Finley D, Kirschner MW, Mao Y

PDB-5vhr:
Conformational Landscape of the p28-Bound Human Proteasome Regulatory Particle
Method: single particle / : Lu Y, Wu J, Dong Y, Chen S, Sun S, Ma YB, Ouyang Q, Finley D, Kirschner MW, Mao Y

PDB-5vhs:
Conformational Landscape of the p28-Bound Human Proteasome Regulatory Particle
Method: single particle / : Lu Y, Wu J, Dong Y, Chen S, Sun S, Ma YB, Ouyang Q, Finley D, Kirschner MW, Mao Y

PDB-5v6p:
CryoEM structure of the ERAD-associated E3 ubiquitin-protein ligase HRD1
Method: single particle / : Schoebel S, Mi W, Stein A, Rapoport TA, Liao M

PDB-5v7v:
Cryo-EM structure of ERAD-associated E3 ubiquitin-protein ligase component HRD3
Method: single particle / : Mi W, Schoebel S, Stein A, Rapoport TA, Liao M

PDB-5w3e:
CryoEM structure of rhinovirus B14 in complex with C5 Fab (33 degrees Celsius, molar ratio 1:3, full particle)
Method: single particle / : Liu Y, Dong Y, Rossmann MG

PDB-5w3l:
CryoEM structure of rhinovirus B14 in complex with C5 Fab (4 degrees Celsius, molar ratio 1:3, full particle)
Method: single particle / : Liu Y, Dong Y, Rossmann MG

PDB-5w3m:
CryoEM structure of rhinovirus B14 in complex with C5 Fab (33 degrees Celsius, molar ratio 1:1, full particle)
Method: single particle / : Liu Y, Dong Y, Rossmann MG

PDB-5w3o:
CryoEM structure of rhinovirus B14 in complex with C5 Fab (33 degrees Celsius, molar ratio 1:3, empty particle)
Method: single particle / : Liu Y, Dong Y, Rossmann MG

PDB-5nsr:
Cryo-EM structure of RNA polymerase-sigma54 holo enzyme with promoter DNA closed complex
Method: single particle / : Glyde R, Ye FZ, Darbari VC, Zhang N, Buck M, Zhang XD

PDB-5nss:
Cryo-EM structure of RNA polymerase-sigma54 holoenzyme with promoter DNA and transcription activator PspF intermedate complex
Method: single particle / : Glyde R, Ye FZ, Darbari VC, Zhang N, Buck M, Zhang XD

PDB-5uu5:
Bacteriophage P22 mature virion capsid protein
Method: single particle / : Hryc CF, Chen DH, Afonine PV, Jakana J, Wang Z, Haase-Pettingell C, Jiang W, Adams PD, King JA, Schmid MF, Chiu W

PDB-5h64:
Cryo-EM structure of mTORC1
Method: single particle / : Yang H, Wang J, Liu M, Chen X, Huang M, Tan D, Dong M, Wong CCL, Wang J, Xu Y, Wang H

PDB-5lqx:
Structure of F-ATPase from Pichia angusta, state3
Method: single particle / : Vinothkumar KR, Montgomery MG, Liu S, Walker JE

PDB-5lqy:
Structure of F-ATPase from Pichia angusta, state2
Method: single particle / : Vinothkumar KR, Montgomery MG, Liu S, Walker JE

PDB-5lqz:
Structure of F-ATPase from Pichia angusta, state1
Method: single particle / : Vinothkumar KR, Montgomery MG, Liu S, Walker JE

PDB-5t0c:
Structural basis for dynamic regulation of the human 26S proteasome
Method: single particle / : Chen S, Wu J, Lu Y, Ma YB, Lee BH, Yu Z, Ouyang Q, Finley D, Kirschner MW, Mao Y

PDB-5t0g:
Structural basis for dynamic regulation of the human 26S proteasome
Method: single particle / : Chen S, Wu J, Lu Y, Ma YB, Lee BH, Yu Z, Ouyang Q, Finley D, Kirschner MW, Mao Y

PDB-5t0h:
Structural basis for dynamic regulation of the human 26S proteasome
Method: single particle / : Chen S, Wu J, Lu Y, Ma YB, Lee BH, Yu Z, Ouyang Q, Finley D, Kirschner MW, Mao Y

PDB-5t0i:
Structural basis for dynamic regulation of the human 26S proteasome
Method: single particle / : Chen S, Wu J, Lu Y, Ma YB, Lee BH, Yu Z, Ouyang Q, Finley D, Kirschner MW, Mao Y

PDB-5t0j:
Structural basis for dynamic regulation of the human 26S proteasome
Method: single particle / : Chen S, Wu J, Lu Y, Ma YB, Lee BH, Yu Z, Ouyang Q, Finley D, Kirschner MW, Mao Y

PDB-5jpq:
Cryo-EM structure of the 90S pre-ribosome
Method: single particle / : Turk M, Cheng J, Berninghausen O, Kornprobst M, Flemming D, Kos-Braun IC, Kos M, Thoms M, Hurt E, Beckmann R

PDB-5g06:
Cryo-EM structure of yeast cytoplasmic exosome
Method: single particle / : Liu JJ, Niu CY, Wu Y, Tan D, Wang Y, Ye MD, Liu Y, Zhao WW, Zhou K, Liu QS, Dai JB, Yang XR, Dong MQ, Huang N, Wang HW

PDB-3jct:
Cryo-em structure of eukaryotic pre-60S ribosomal subunits
Method: single particle / : Wu S, Kumcuoglu B, Yan KG, Brown H, Zhang YX, Tan D, Gamalinda M, Yuan Y, Li ZF, Jakovljevic J, Ma CY, Lei JL, Dong MQ, Woolford Jr JL, Gao N

PDB-3jcu:
Cryo-EM structure of spinach PSII-LHCII supercomplex at 3.2 Angstrom resolution
Method: single particle / : Wei XP, Zhang XZ, Su XD, Cao P, Liu XY, Li M, Chang WR, Liu ZF

PDB-5fna:
Cryo-EM reconstruction of caspase-1 CARD
Method: helical / : Li Y, Lu A, Schmidt FI, Yin Q, Chen S, Fu TM, Tong AB, Ploegh HL, Mao Y, Wu H

PDB-3j7l:
Full virus map of brome mosaic virus
Method: single particle / : Wang Z, Hryc C, Bammes B, Afonine PV, Jakana J, Chen DH, Liu X, Baker ML, Kao C, Ludtke SJ, Schmid MF, Adams PD, Chiu W

PDB-3j7m:
Virus model of brome mosaic virus (first half data set)
Method: single particle / : Wang Z, Hryc C, Bammes B, Afonine PV, Jakana J, Chen DH, Liu X, Baker ML, Kao C, Ludtke SJ, Schmid MF, Adams PD, Chiu W

PDB-3j7n:
Virus model of brome mosaic virus (second half data set)
Method: single particle / : Wang Z, Hryc C, Bammes B, Afonine PV, Jakana J, Chen DH, Liu X, Baker ML, Kao C, Ludtke SJ, Schmid MF, Adams PD, Chiu W

PDB-3zee:
Electron cyro-microscopy helical reconstruction of Par-3 N terminal domain
Method: helical / : Zhang Y, Wang W, Chen J, Zhang K, Gao F, Gong W, Zhang M, Sun F, Feng W

PDB-3j32:
An asymmetric unit map from electron cryo-microscopy of Haliotis diversicolor molluscan hemocyanin isoform 1 (HdH1)
Method: single particle / : Zhang Q, Dai X, Cong Y, Zhang J, Chen DH, Dougherty M, Wang J, Ludtke S, Schmid MF, Chiu W

PDB-3j2u:
Kinesin-13 KLP10A HD in complex with CS-tubulin and a microtubule
Method: helical / : Asenjo AB, Chatterjee C, Tan D, DePaoli V, Rice WJ, Diaz-Avalos R, Silvestry M, Sosa H

PDB-2xyy:
De Novo model of Bacteriophage P22 procapsid coat protein
Method: single particle / : Chen DH, Baker ML, Hryc CF, DiMaio F, Jakana J, Wu W, Dougherty M, Haase-Pettingell C, Schmid MF, Jiang W, Baker D, King JA, Chiu W

PDB-2xyz:
De Novo model of Bacteriophage P22 virion coat protein
Method: single particle / : Chen DH, Baker ML, Hryc CF, DiMaio F, Jakana J, Wu W, Dougherty M, Haase-Pettingell C, Schmid MF, Jiang W, Baker D, King JA, Chiu W

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Oct 4, 2017. Three pioneers of this field were awarded Nobel Prize in Chemistry 2017

Three pioneers of this field were awarded Nobel Prize in Chemistry 2017

  • Jacques Dubochet (University of Lausanne, Switzerland) is a pioneer of ice-embedding method of EM specimen (as known as cryo-EM), Most of 3DEM structures in EMDB and PDB are obtained using his method.
  • Joachim Frank (Columbia University, New York, USA) is a pioneer of single particle reconstruction, which is the most used reconstruction method for 3DEM structures in EMDB and EM entries in PDB. And also, he is a develper of Spider, which is one of the most famous software in this field, and is used for some EM Navigor data (e.g. map projection/slice images).
  • Richard Henderson (MRC Laboratory of Molecular Biology, Cambridge, UK) was determined the first biomolecule structure by EM. The first EM entry in PDB, PDB-1brd is determinedby him.

External links: The 2017 Nobel Prize in Chemistry - Press Release

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Major update of PDB

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