[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database
Q: What is the data source of EM Navigator?
Latest entriesEMDB:
PDB:
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Displayentries / page
Entry
Article
Sample
Experiment
Processing

Yorodumi Search

-
Search result

Showing all 17 items for author: k. & zhou

PDB-5g06:
Cryo-EM structure of yeast cytoplasmic exosome
Method: single particle / : Liu JJ, Niu CY, Wu Y, Tan D, Wang Y, Ye MD, Liu Y, Zhao WW, Zhou K, Liu QS, Dai JB, Yang XR, Dong MQ, Huang N, Wang HW

PDB-5hi9:
Structure of the full-length TRPV2 channel by cryo-electron microscopy
Method: single particle / : Huynh KW, Cohen MR, Jiansen J, Samanta A, Lodowski DT, Zhou ZH, Moiseenkova-Bell VY

PDB-3jb6:
In situ structures of the segmented genome and RNA polymerase complex inside a dsRNA virus
Method: single particle / : Zhang X, Ding K, Yu XK, Chang W, Sun JC, Zhou ZH

PDB-3jb7:
In situ structures of the segmented genome and RNA polymerase complex inside a dsRNA virus
Method: single particle / : Zhang X, Ding K, Yu XK, Chang W, Sun JC, Zhou ZH

PDB-3jay:
Atomic model of transcribing cytoplasmic polyhedrosis virus
Method: single particle / : Yu XK, Jiang JS, Sun JC, Zhou ZH

PDB-3jaz:
Atomic model of cytoplasmic polyhedrosis virus with ATP
Method: single particle / : Yu XK, Jiang JS, Sun JC, Zhou ZH

PDB-3jb0:
Atomic model of cytoplasmic polyhedrosis virus with GTP
Method: single particle / : Yu XK, Jiang JS, Sun JC, Zhou ZH

PDB-3jb1:
Atomic model of cytoplasmic polyhedrosis virus with SAM
Method: single particle / : Yu XK, Jiang JS, Sun JC, Zhou ZH

PDB-3jb2:
Atomic model of cytoplasmic polyhedrosis virus with SAM and GTP
Method: single particle / : Yu XK, Jiang JS, Sun JC, Zhou ZH

PDB-3jb3:
Atomic model of cytoplasmic polyhedrosis virus with SAM, GTP and ATP
Method: single particle / : Yu XK, Jiang JS, Sun JC, Zhou ZH

PDB-3j8x:
High-resolution structure of no-nucleotide kinesin on microtubules
Method: helical / : Shang Z, Zhou K, Xu C, Csencsits R, Cochran JC, Sindelar CV

PDB-3j8y:
High-resolution structure of ATP analog-bound kinesin on microtubules
Method: helical / : Shang Z, Zhou K, Xu C, Csencsits R, Cochran JC, Sindelar CV

PDB-4ckg:
Helical reconstruction of ACAP1(BAR-PH domain) decorated membrane tubules by cryo-electron microscopy
Method: helical / : Pang XY, Fan J, Zhang Y, Zhang K, Gao BQ, Ma J, Li J, Deng YC, Zhou QJ, Hsu V, Sun F

PDB-4ckh:
Helical reconstruction of ACAP1(BAR-PH domain) decorated membrane tubules by cryo-electron microscopy
Method: helical / : Pang XY, Fan J, Zhang Y, Zhang K, Gao BQ, Ma J, Li J, Deng YC, Zhou QJ, Hsu V, Sun F

PDB-3j0a:
Homology model of human Toll-like receptor 5 fitted into an electron microscopy single particle reconstruction
Method: single particle / : Modis Y, Zhou K, Kanai R, Lee P, Wang HW

PDB-3k1q:
Backbone model of an aquareovirus virion by cryo-electron microscopy and bioinformatics
Method: single particle / : Cheng LP, Zhu J, Hiu WH, Zhang XK, Honig B, Fang Q, Zhou ZH

PDB-3b8k:
Structure of the Truncated Human Dihydrolipoyl Acetyltransferase (E2)
Method: single particle / : Yu X, Hiromasa Y, Tsen H, Stoops JK, Roche TE, Zhou ZH

+
About EMN search

-
News

-
Jul 12, 2017. Major update of PDB

Major update of PDB

  • wwPDB released updated PDB data conforming to the new PDBx/mmCIF dictionary. This is a major update changing the version number from 4 to 5, and with Remediation, in which all the entries are updated. See below links for details.
  • In this update, many items about electron microscopy experimental information are reorganized (e.g. em_software). Now, EM Navigator and Yorodumi are based on the updated data.

External links: wwPDB Remediation / Enriched Model Files Conforming to OneDep Data Standards Now Available in the PDB FTP Archive

-
Jun 16, 2017. Omokage search with filter

Omokage search with filter

  • Result of Omokage search can be filtered by keywords and the database types

Related info.: Omokage search

+
Sep 15, 2016. EM Navigator & Yorodumi renewed

EM Navigator & Yorodumi renewed

  • New versions of EM Navigator and Yorodumi started

Related info.: Changes in new EM Navigator and Yorodumi / EM Navigator (legacy version) / Yorodumi (legacy version)

+
Aug 31, 2016. New EM Navigator & Yorodumi

New EM Navigator & Yorodumi

  • In 15th Sep 2016, the development versions of EM Navigator and Yorodumi will replace the official versions.
  • Current version will continue as 'legacy version' for some time.

Related info.: Changes in new EM Navigator and Yorodumi / EM Navigator / Yorodumi / EM Navigator (legacy version) / Yorodumi (legacy version)

+
Apr 13, 2016. Omokage search got faster

Omokage search got faster

  • The computation time became ~1/2 compared to the previous version by re-optimization of data accession
  • Enjoy "shape similarity" of biomolecules, more!

Related info.: Omokage search

Read more

-
EMN Search

3DEM data search

  • Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.: EMDB / PDB / EM Navigator / Q: What is the data source of EM Navigator? / Yorodumi Search

Read more