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Showing all 31 items for author: e. & v. & orlova

PDB-5a79:
Novel inter-subunit contacts in Barley Stripe Mosaic Virus revealed by cryo-EM
Method: single particle / : Clare DK, Pechnikova E, Skurat E, Makarov V, Sokolova OS, Solovyev AG, V Orlova E

PDB-5a7a:
Novel inter-subunit contacts in Barley Stripe Mosaic Virus revealed by cryo-EM
Method: single particle / : Clare DK, Pechnikova E, Skurat E, Makarov V, Sokolova OS, Solovyev AG, V Orlova E

PDB-5a9k:
Structural basis for DNA strand separation by a hexameric replicative helicase
Method: single particle / : Chaban Y, Stead JA, Ryzhenkova K, Whelan F, Lamber K, Antson F, Sanders CM, Orlova EV

PDB-5a20:
Structure of bacteriophage SPP1 head-to-tail interface filled with DNA and tape measure protein
Method: single particle / : Chaban Y, Lurz R, Brasiles S, Cornilleau C, Karreman M, Zinn-Justin S, Tavares P, Orlova EV

PDB-5a21:
Structure of bacteriophage SPP1 head-to-tail interface without DNA and tape measure protein
Method: single particle / : Chaban Y, Lurz R, Brasiles S, Cornilleau C, Karreman M, Zinn-Justin S, Tavares P, Orlova EV

PDB-3j8i:
Near-Atomic Resolution for One State of F-Actin
Method: helical / : Galkin VE

PDB-3j8j:
Tilted state of actin, T1
Method: helical / : Galkin VE, Orlova A, Vos MR, Schroder GF, Egelman EH

PDB-3j8k:
Tilted state of actin, T2
Method: helical / : Galkin VE, Orlova A, Vos MR, Schroder GF, Egelman EH

PDB-2m5k:
Atomic-resolution structure of a doublet cross-beta amyloid fibril
Method: single particle / : Fitzpatrick AWP, Debelouchina GT, Bayro MJ, Clare DK, Caporini MA, Bajaj VS, Jaroniec CP, Wang L, Ladizhansky V, Muller S, MacPhee CE, Waudby CA, Mott HR, de Simone A, Knowles TPJ, Saibil HR, Vendruscolo M, Orlova EV, Griffin RG, Dobson CM

PDB-2m5m:
Atomic-resolution structure of a triplet cross-beta amyloid fibril
Method: single particle / : Fitzpatrick AWP, Debelouchina GT, Bayro MJ, Clare DK, Caporini MA, Bajaj VS, Jaroniec CP, Wang L, Ladizhansky V, Muller S, MacPhee CE, Waudby CA, Mott HR, de Simone A, Knowles TPJ, Saibil HR, Vendruscolo M, Orlova EV, Griffin RG, Dobson CM

PDB-3zpk:
Atomic-resolution structure of a quadruplet cross-beta amyloid fibril
Method: single particle / : Fitzpatrick AwP, Debelouchina GT, Bayro MJ, Clare DK, Caporini MA, Bajaj VS, Jaroniec CP, Wang L, Ladizhansky V, Muller SA, MacPhee CE, Waudby CA, Mott HR, de Simone A, Knowles TPJ, Saibil HR, Vendruscolo M, Orlova EV, Griffin RG, Dobson CM

PDB-2ypw:
Atomic model for the N-terminus of TraO fitted in the full-length structure of the bacterial pKM101 type IV secretion system core complex
Method: single particle / : Rivera-Calzada A, Fronzes R, Savva CG, Chandran V, Lian PW, Laeremans T, Pardon E, Steyaert J, Remaut H, Waksman G, Orlova EV

PDB-3zbi:
Fitting result in the O-layer of the subnanometer structure of the bacterial pKM101 type IV secretion system core complex digested with elastase
Method: single particle / : Rivera-Calzada A, Fronzes R, Savva CG, Chandran V, Lian PW, Laeremans T, Pardon E, Steyaert J, Remaut H, Waksman G, Orlova EV

PDB-3zbj:
Fitting results in the I-layer of the subnanometer structure of the bacterial pKM101 type IV secretion system core complex digested with elastase
Method: single particle / : Rivera-Calzada A, Fronzes R, Savva CG, Chandran V, Lian PW, Laeremans T, Pardon E, Steyaert J, Remaut H, Waksman G, Orlova EV

PDB-4an5:
Capsid structure and its Stability at the Late Stages of Bacteriophage SPP1 Assembly
Method: single particle / : White HE, Sherman MB, Brasiles S, Jacquet E, Seavers P, Tavares P, Orlova EV

PDB-3j0s:
Remodeling of actin filaments by ADF cofilin proteins
Method: helical / : Galkin VE, Orlova A, Kudryashov DS, Solodukhin A, Reisler E, Schroeder GF, Egelman EH

PDB-2xea:
4.6 ANGSTROM CRYO-EM RECONSTRUCTION OF TOBACCO MOSAIC VIRUS FROM IMAGES RECORDED AT 300 KEV ON A 4KX4K CCD CAMERA
Method: helical / : Clare DK, Orlova EV

PDB-3lue:
Model of alpha-actinin CH1 bound to F-actin
Method: helical / : Galkin VE, Orlova A, Salmazo A, Djinovic-Carugo K, Egelman EH

PDB-3iku:
Structural model of ParM filament in closed state from cryo-EM
Method: helical / : Galkin VE, Orlova A, Rivera C, Mullins RD, Egelman EH

PDB-3iky:
Structural model of ParM filament in the open state by cryo-EM
Method: helical / : Galkin VE, Orlova A, Rivera C, Mullins RD, Egelman EH

PDB-3cre:
Electron Microscopy model of the Saf Pilus- Type A
Method: helical / : Salih O, Remaut H, Waksman G, Orlova EV

PDB-3crf:
Electron Microscopy model of the Saf Pilus- Type B
Method: helical / : Salih O, Remaut H, Waksman G, Orlova EV

PDB-3byh:
Model of actin-fimbrin ABD2 complex
Method: helical / : Galkin VE, Orlova A, Cherepanova O, Lebart MC, Egelman EH

PDB-2qu4:
Model for Bacterial ParM Filament
Method: helical / : Orlova A, Garner EC, Galkin VE, Heuser J, Mullins RD, Egelman EH

PDB-2j9i:
Lengsin is a survivor of an ancient family of class I glutamine synthetases in eukaryotes that has undergone evolutionary re- engineering for a tissue-specific role in the vertebrate eye lens.
Method: single particle / : Wyatt K, White HE, Wang L, Bateman OA, Slingsby C, Orlova EV, Wistow G

PDB-2h50:
Multiple distinct assemblies reveal conformational flexibility in the small heat shock protein Hsp26
Method: single particle / : White HE, Orlova EV, Chen S, Wang L, Ignatiou A, Gowen B, Stromer T, Franzmann TM, Haslbeck M, Buchner J, Saibil HR

PDB-2h53:
Multiple distinct assemblies reveal conformational flexibility in the small heat shock protein Hsp26
Method: single particle / : White HE, Orlova EV, Chen S, Wang L, Ignatiou A, Gowen B, Stromer T, Franzmann TM, Haslbeck M, Buchner J, Saibil HR

PDB-2byu:
Negative stain EM reconstruction of M.tuberculosis Acr1(Hsp 16.3) fitted with wheat sHSP dimer
Method: single particle / : Kennaway CK, Benesch JLP, Gohlke U, Wang L, Robinson CV, Orlova EV, Saibil HR, Keep NH

PDB-2bk1:
The pore structure of pneumolysin, obtained by fitting the alpha carbon trace of perfringolysin O into a cryo-EM map
Method: single particle / : Tilley SJ, Orlova EV, Gilbert RJC, Andrew PW, Saibil HR

PDB-2bk2:
The prepore structure of pneumolysin, obtained by fitting the alpha carbon trace of perfringolysin O into a cryo-EM map
Method: single particle / : Tilley SJ, Orlova EV, Gilbert RJC, Andrew PW, Saibil HR

PDB-1ml5:
Structure of the E. coli ribosomal termination complex with release factor 2
Method: single particle / : Klaholz BP, Pape T, Zavialov AV, Myasnikov AG, Orlova EV, Vestergaard B, Ehrenberg M, van Heel M

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Oct 4, 2017. Three pioneers of this field were awarded Nobel Prize in Chemistry 2017

Three pioneers of this field were awarded Nobel Prize in Chemistry 2017

  • Jacques Dubochet (University of Lausanne, Switzerland) is a pioneer of ice-embedding method of EM specimen (as known as cryo-EM), Most of 3DEM structures in EMDB and PDB are obtained using his method.
  • Joachim Frank (Columbia University, New York, USA) is a pioneer of single particle reconstruction, which is the most used reconstruction method for 3DEM structures in EMDB and EM entries in PDB. And also, he is a develper of Spider, which is one of the most famous software in this field, and is used for some EM Navigor data (e.g. map projection/slice images).
  • Richard Henderson (MRC Laboratory of Molecular Biology, Cambridge, UK) was determined the first biomolecule structure by EM. The first EM entry in PDB, PDB-1brd is determinedby him.

External links: The 2017 Nobel Prize in Chemistry - Press Release

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