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Showing all 22 items for author: baker, & t.s

PDB-5ipi:
Structure of Adeno-associated virus type 2 VLP
Method: single particle / : Drouin LM, Lins B, Janssen ME, Bennet A, Chipman P, McKenna R, Chen W, Muzyczka N, Cardone G, Baker TS, Agbandje-McKenna M

PDB-5ipk:
Structure of the R432A variant of Adeno-associated virus type 2 VLP
Method: single particle / : Drouin LM, Lins B, Janssen ME, Bennet A, Chipman P, McKenna R, Chen W, Muzyczka N, Cardone G, Baker TS, Agbandje-McKenna M

PDB-3j0f:
Sindbis virion
Method: single particle / : Tang J, Jose J, Zhang W, Chipman P, Kuhn RJ, Baker TS

PDB-3iys:
Homology model of avian polyomavirus asymmetric unit
Method: single particle / : Shen PS, Enderlein D, Nelson CDS, Carter WS, Kawano M, Xing L, Swenson RD, Olson NH, Baker TS, Cheng RH, Atwood WJ, Johne R, Belnap DM

PDB-3iym:
Backbone Trace of the Capsid Protein Dimer of a Fungal Partitivirus from Electron Cryomicroscopy and Homology Modeling
Method: single particle / : Tang J, Pan J, Havens WF, Ochoa WF, Li H, Sinkovits RS, Guu TSY, Ghabrial SA, Nibert ML, Tao JY, Baker TS

PDB-3iyh:
P22 procapsid coat protein structures reveal a novel mechanism for capsid maturation: Stability without auxiliary proteins or chemical cross-links
Method: single particle / : Parent KN, Khayat R, Tu LH, Suhanovsky MM, Cortines JR, Teschke CM, Johnson JE, Baker TS

PDB-3iyi:
P22 expanded head coat protein structures reveal a novel mechanism for capsid maturation: Stability without auxiliary proteins or chemical cross-links
Method: single particle / : Parent KN, Khayat R, Tu LH, Suhanovsky MM, Cortines JR, Teschke CM, Johnson JE, Baker TS

PDB-1z8y:
Mapping the E2 Glycoprotein of Alphaviruses
Method: single particle / : Mukhopadhyay S, Zhang W, Gabler S, Chipman PR, Strauss EG, Strauss JH, Baker TS, Kuhn RJ, Rossmann MG

PDB-2cse:
Features of Reovirus Outer-Capsid Protein mu1 Revealed by Electron and Image Reconstruction of the virion at 7.0-A Resolution
Method: single particle / : Zhang X, Ji Y, Zhang L, Harrison SC, Marinescu DC, Nibert ML, Baker TS

PDB-1tge:
The structure of immature Dengue virus at 12.5 angstrom
Method: single particle / : Zhang Y, Zhang W, Ogata S, Clements D, Strauss JH, Baker TS, Kuhn RJ, Rossmann MG

PDB-1thd:
COMPLEX ORGANIZATION OF DENGUE VIRUS E PROTEIN AS REVEALED BY 9.5 ANGSTROM CRYO-EM RECONSTRUCTION
Method: single particle / : Zhang Y, Zhang W, Ogata S, Clements D, Strauss JH, Baker TS, Kuhn RJ, Rossmann MG

PDB-1na4:
The structure of immature Yellow Fever virus particle
Method: single particle / : Zhang Y, Corver J, Chipman PR, Lenches E, Zhang W, Pletnev SV, Sedlak D, Baker TS, Strauss JH, Kuhn RJ, Rossmann MG

PDB-1uon:
REOVIRUS POLYMERASE LAMBDA-3 LOCALIZED BY ELECTRON CRYOMICROSCOPY OF VIRIONS AT 7.6-A RESOLUTION
Method: single particle / : Zhang X, Walker SB, Chipman PR, Nibert ML, Baker TS

PDB-1p58:
Complex Organization of Dengue Virus Membrane Proteins as Revealed by 9.5 Angstrom Cryo-EM reconstruction
Method: single particle / : Zhang W, Chipman PR, Corver J, Johnson PR, Zhang Y, Mukhopadhyay S, Baker TS, Strauss JH, Rossmann MG, Kuhn RJ

PDB-1n6g:
The structure of immature Dengue-2 prM particles
Method: single particle / : Zhang Y, Corver J, Chipman PR, Zhang W, Pletnev SV, Sedlak D, Baker TS, Strauss JH, Kuhn RJ, Rossmann MG

PDB-1m0f:
Structural Studies of Bacteriophage alpha3 Assembly, Cryo-electron microscopy
Method: single particle / : Bernal RA, Hafenstein S, Olson NH, Bowman VD, Chipman PR, Baker TS, Fane BA, Rossmann MG

PDB-1m4x:
PBCV-1 virus capsid, quasi-atomic model
Method: single particle / : Nandhagopal N, Simpson AA, Gurnon JR, Yan X, Baker TS, Graves MV, Van Etten JL, Rossmann MG

PDB-1ld4:
Placement of the Structural Proteins in Sindbis Virus
Method: single particle / : Zhang W, Mukhopadhyay S, Pletnev SV, Baker TS, Kuhn RJ, Rossmann MG

PDB-1m11:
structural model of human decay-accelerating factor bound to echovirus 7 from cryo-electron microscopy
Method: single particle / : He Y, Lin F, Chipman PR, Bator CM, Baker TS, Shoham M, Kuhn RJ, Medof ME, Rossmann MG

PDB-1k4r:
Structure of Dengue Virus
Method: single particle / : Kuhn RJ, Zhang W, Rossmann MG, Pletnev SV, Corver J, Lenches E, Jones CT, Mukhopadhyay S, Chipman PR, Strauss EG, Baker TS, Strauss JH

PDB-1foq:
PENTAMERIC MODEL OF THE BACTERIOPHAGE PHI29 PROHEAD RNA
Method: single particle / : Simpson AA, Tao Y, Leiman PG, Badasso MO, He Y, Jardine PJ, Olson NH, Morais MC, Grimes S, Anderson DL, Baker TS, Rossmann MG

PDB-1dgi:
Cryo-EM structure of human poliovirus(serotype 1)complexed with three domain CD155
Method: single particle / : He Y, Bowman VD, Mueller S, Bator CM, Bella J, Peng X, Baker TS, Wimmer E, Kuhn RJ, Rossmann MG

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Oct 4, 2017. Three pioneers of this field were awarded Nobel Prize in Chemistry 2017

Three pioneers of this field were awarded Nobel Prize in Chemistry 2017

  • Jacques Dubochet (University of Lausanne, Switzerland) is a pioneer of ice-embedding method of EM specimen (as known as cryo-EM), Most of 3DEM structures in EMDB and PDB are obtained using his method.
  • Joachim Frank (Columbia University, New York, USA) is a pioneer of single particle reconstruction, which is the most used reconstruction method for 3DEM structures in EMDB and EM entries in PDB. And also, he is a develper of Spider, which is one of the most famous software in this field, and is used for some EM Navigor data (e.g. map projection/slice images).
  • Richard Henderson (MRC Laboratory of Molecular Biology, Cambridge, UK) was determined the first biomolecule structure by EM. The first EM entry in PDB, PDB-1brd is determinedby him.

External links: The 2017 Nobel Prize in Chemistry - Press Release

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