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<big>'''eF-site'''</big>
<big>'''eF-site'''</big>


[http://ef-site.hgc.jp/eF-site/ eFsite] (electrostatic-surface of Functional site) is a database for molecular surfaces of proteins' functional sites, displaying the electrostatic potentials and hydrophobic properties together on the Connolly surfaces of the active sites, for analyses of the molecular recognition mechanisms.
[https://pdbj.org/eF-site/ eF-site] (electrostatic-surface of Functional site) is a database of the molecular surfaces and the electrostatic potentials in all entries in PDB.
(see [[eF-site_Help|Help]] page for details)
(see [[eF-site_Help|Help]] page for details)


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<big>'''eF-surf'''</big>
<big>'''eF-surf'''</big>


[http://ef-site.hgc.jp/eF-surf/ eF-surf] is a web server to calculate the molecular surface of the up-loaded file with PDB format in the same way as the eF-site database.
[https://pdbj.org/eF-surf/ eF-surf] is a web server to calculate the molecular surface of the up-loaded file with PDB format in the same way as the eF-site database.
(see [[eF-surf_Help|Help]] page for details)
(see [[eF-surf_Help|Help]] page for details)


<big>'''eF-seek'''</big>
<big>'''eF-seek'''</big>


[http://ef-site.hgc.jp/eF-seek/ eF-seek] is a web server to search for the similar ligand binding sites for the uploaded coordinate file with PDB format.  
[https://pdbj.org/eF-seek/ eF-seek] is a web server to search for the similar ligand binding sites for the uploaded coordinate file with PDB format.  
(see [[eF-seek_Help|Help]] page for details)
(see [[eF-seek_Help|Help]] page for details)

Latest revision as of 10:36, 25 June 2020

This wiki site offers information on our web applications.


eF-site

eF-site (electrostatic-surface of Functional site) is a database of the molecular surfaces and the electrostatic potentials in all entries in PDB. (see Help page for details)


eF-surf

eF-surf is a web server to calculate the molecular surface of the up-loaded file with PDB format in the same way as the eF-site database. (see Help page for details)


eF-seek

eF-seek is a web server to search for the similar ligand binding sites for the uploaded coordinate file with PDB format. (see Help page for details)