eF-site ID 9rsa-B
PDB Code 9rsa
Chain B

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Title CRYSTAL STRUCTURE OF TWO COVALENT NUCLEOSIDE DERIVATIVES OF RIBONUCLEASE A
Classification HYDROLASE (PHOSPHORIC DIESTER)
Compound RIBONUCLEASE A
Source Bos taurus (Bovine) (RNAS1_BOVIN)
Sequence B:  KETAAAKFERQHMDSSTSAASSSNYCNQMMKSRNLTKDRC
KPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMS
ITDCRETGSSKYPNCAYKTTQANKHIIVACEGNPYVPVHF
DASV
Description (1)  RIBONUCLEASE A (PHOSPHATE-FREE) (E.C.3.1.27.5) COMPLEX WITH ND1.119-N-ACETYL DEOXYURIDINE


Functional site

1) chain B
residue 12
type
sequence H
description ACTIVE SITE OF THE ENZYME IN CHAIN B
source : AD2

2) chain B
residue 41
type
sequence K
description ACTIVE SITE OF THE ENZYME IN CHAIN B
source : AD2

3) chain B
residue 43
type
sequence V
description ACTIVE SITE OF THE ENZYME IN CHAIN B
source : AD2

4) chain B
residue 44
type
sequence N
description ACTIVE SITE OF THE ENZYME IN CHAIN B
source : AD2

5) chain B
residue 45
type
sequence T
description ACTIVE SITE OF THE ENZYME IN CHAIN B
source : AD2

6) chain B
residue 119
type
sequence H
description ACTIVE SITE OF THE ENZYME IN CHAIN B
source : AD2

7) chain B
residue 120
type
sequence F
description ACTIVE SITE OF THE ENZYME IN CHAIN B
source : AD2

8) chain B
residue 121
type
sequence D
description ACTIVE SITE OF THE ENZYME IN CHAIN B
source : AD2

9) chain B
residue 123
type
sequence S
description ACTIVE SITE OF THE ENZYME IN CHAIN B
source : AD2

10) chain B
residue 118
type
sequence V
description BINDING SITE FOR RESIDUE ADU B 125
source : AC2

11) chain B
residue 119
type
sequence H
description BINDING SITE FOR RESIDUE ADU B 125
source : AC2

12) chain B
residue 12
type catalytic
sequence H
description 164
source MCSA : MCSA2

13) chain B
residue 41
type catalytic
sequence K
description 164
source MCSA : MCSA2

14) chain B
residue 119
type catalytic
sequence H
description 164
source MCSA : MCSA2

15) chain B
residue 120
type catalytic
sequence F
description 164
source MCSA : MCSA2

16) chain B
residue 121
type catalytic
sequence D
description 164
source MCSA : MCSA2

17) chain B
residue 85
type BINDING
sequence R
description
source Swiss-Prot : SWS_FT_FI3

18) chain B
residue 7
type BINDING
sequence K
description
source Swiss-Prot : SWS_FT_FI3

19) chain B
residue 10
type BINDING
sequence R
description
source Swiss-Prot : SWS_FT_FI3

20) chain B
residue 41
type BINDING
sequence K
description
source Swiss-Prot : SWS_FT_FI3

21) chain B
residue 66
type BINDING
sequence K
description
source Swiss-Prot : SWS_FT_FI3

22) chain B
residue 1
type CARBOHYD
sequence K
description N-linked (Glc) (glycation) lysine; in vitro => ECO:0000269|PubMed:4030761
source Swiss-Prot : SWS_FT_FI4

23) chain B
residue 7
type CARBOHYD
sequence K
description N-linked (Glc) (glycation) lysine; in vitro => ECO:0000269|PubMed:4030761
source Swiss-Prot : SWS_FT_FI4

24) chain B
residue 37
type CARBOHYD
sequence K
description N-linked (Glc) (glycation) lysine; in vitro => ECO:0000269|PubMed:4030761
source Swiss-Prot : SWS_FT_FI4

25) chain B
residue 41
type CARBOHYD
sequence K
description N-linked (Glc) (glycation) lysine; in vitro => ECO:0000269|PubMed:4030761
source Swiss-Prot : SWS_FT_FI4

26) chain B
residue 34
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine; partial => ECO:0000269|PubMed:19358553
source Swiss-Prot : SWS_FT_FI5

27) chain B
residue 12
type ACT_SITE
sequence H
description Proton acceptor
source Swiss-Prot : SWS_FT_FI1

28) chain B
residue 119
type ACT_SITE
sequence H
description Proton donor
source Swiss-Prot : SWS_FT_FI2


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