eF-site ID 8kme-2
PDB Code 8kme
Chain 2

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Title CRYSTAL STRUCTURE OF HUMAN ALPHA-THROMBIN INHIBITED WITH SEL2770.
Classification HYDROLASE/HYDROLASE INHIBITOR
Compound THROMBIN
Source ORGANISM_COMMON: human; ORGANISM_SCIENTIFIC: Homo sapiens;
Sequence 2:  IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLT
AAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM
LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCL
PDRETAASLLQAGYKGRVTGWGNLKETGQPSVLQVVNLPI
VERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGG
PFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLK
KWIQKVIDQF
Description


Functional site

1) chain 2
residue 169
type
sequence K
description BINDING SITE FOR RESIDUE NA 2 950
source : AC1

2) chain 2
residue 172
type
sequence T
description BINDING SITE FOR RESIDUE NA 2 950
source : AC1

3) chain 2
residue 224
type
sequence K
description BINDING SITE FOR RESIDUE NA 2 951
source : AC2

4) chain 2
residue 34
type
sequence F
description BINDING SITE FOR CHAIN 3 OF N-ACETYLHIRUDIN
source : AC3

5) chain 2
residue 36
type
sequence K
description BINDING SITE FOR CHAIN 3 OF N-ACETYLHIRUDIN
source : AC3

6) chain 2
residue 38
type
sequence Q
description BINDING SITE FOR CHAIN 3 OF N-ACETYLHIRUDIN
source : AC3

7) chain 2
residue 65
type
sequence L
description BINDING SITE FOR CHAIN 3 OF N-ACETYLHIRUDIN
source : AC3

8) chain 2
residue 73
type
sequence R
description BINDING SITE FOR CHAIN 3 OF N-ACETYLHIRUDIN
source : AC3

9) chain 2
residue 74
type
sequence T
description BINDING SITE FOR CHAIN 3 OF N-ACETYLHIRUDIN
source : AC3

10) chain 2
residue 76
type
sequence Y
description BINDING SITE FOR CHAIN 3 OF N-ACETYLHIRUDIN
source : AC3

11) chain 2
residue 80
type
sequence E
description BINDING SITE FOR CHAIN 3 OF N-ACETYLHIRUDIN
source : AC3

12) chain 2
residue 81
type
sequence K
description BINDING SITE FOR CHAIN 3 OF N-ACETYLHIRUDIN
source : AC3

13) chain 2
residue 82
type
sequence I
description BINDING SITE FOR CHAIN 3 OF N-ACETYLHIRUDIN
source : AC3

14) chain 2
residue 99
type
sequence L
description BINDING SITE FOR CHAIN 4 OF SEL2770
source : AC4

15) chain 2
residue 174
type
sequence I
description BINDING SITE FOR CHAIN 4 OF SEL2770
source : AC4

16) chain 2
residue 189
type
sequence D
description BINDING SITE FOR CHAIN 4 OF SEL2770
source : AC4

17) chain 2
residue 190
type
sequence A
description BINDING SITE FOR CHAIN 4 OF SEL2770
source : AC4

18) chain 2
residue 192
type
sequence E
description BINDING SITE FOR CHAIN 4 OF SEL2770
source : AC4

19) chain 2
residue 214
type
sequence S
description BINDING SITE FOR CHAIN 4 OF SEL2770
source : AC4

20) chain 2
residue 215
type
sequence W
description BINDING SITE FOR CHAIN 4 OF SEL2770
source : AC4

21) chain 2
residue 216
type
sequence G
description BINDING SITE FOR CHAIN 4 OF SEL2770
source : AC4

22) chain 2
residue 217
type
sequence E
description BINDING SITE FOR CHAIN 4 OF SEL2770
source : AC4

23) chain 2
residue 219
type
sequence G
description BINDING SITE FOR CHAIN 4 OF SEL2770
source : AC4

24) chain 2
residue 220
type
sequence C
description BINDING SITE FOR CHAIN 4 OF SEL2770
source : AC4

25) chain 2
residue 57
type
sequence H
description CATALYTIC SITE
source : CAT

26) chain 2
residue 102
type
sequence D
description CATALYTIC SITE
source : CAT

27) chain 2
residue 195
type
sequence S
description CATALYTIC SITE
source : CAT

28) chain 2
residue 57
type ACT_SITE
sequence H
description Charge relay system
source Swiss-Prot : SWS_FT_FI1

29) chain 2
residue 102
type ACT_SITE
sequence D
description Charge relay system
source Swiss-Prot : SWS_FT_FI1

30) chain 2
residue 195
type ACT_SITE
sequence S
description Charge relay system
source Swiss-Prot : SWS_FT_FI1

31) chain 2
residue 53-58
type prosite
sequence LTAAHC
description TRYPSIN_HIS Serine proteases, trypsin family, histidine active site. LTAAHC
source prosite : PS00134

32) chain 2
residue 189-200
type prosite
sequence DACEGDSGGPFV
description TRYPSIN_SER Serine proteases, trypsin family, serine active site. DAceGDSGGPFV
source prosite : PS00135

33) chain 2
residue 60
type CARBOHYD
sequence L
description N-linked (GlcNAc...) (complex) asparagine => ECO:0000269|PubMed:16335952, ECO:0000269|PubMed:19139490, ECO:0000269|PubMed:19159218, ECO:0000269|PubMed:19838169, ECO:0000269|PubMed:873923
source Swiss-Prot : SWS_FT_FI2


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