eF-site ID 7kol-A
PDB Code 7kol
Chain A

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Title The crystal structure of Papain-Like Protease of SARS CoV-2 in complex with PLP_Snyder496 inhibitor
Classification HYDROLASE/HYDROLASE inhibitor
Compound Papain-like protease
Source (R1A_SARS2)
Sequence A:  VFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKP
HNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSA
LNHTKKWKYPQVNGLTSIKWADNNCYLATALLTLQQIELK
FNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVR
ETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVEAVM
YMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSA
PPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCID
GALLTKSSEYKGPITDVFYKENSYTTTI
Description


Functional site

1) chain A
residue 189-226
type ZN_FING
sequence CKTCGQQQTTLKGVEAVMYMGTLSYEQFKKGVQIPCTC
description C4-type => ECO:0000255|PROSITE-ProRule:PRU00444
source Swiss-Prot : SWS_FT_FI1

2) chain A
residue 189
type BINDING
sequence C
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00444
source Swiss-Prot : SWS_FT_FI4

3) chain A
residue 192
type BINDING
sequence C
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00444
source Swiss-Prot : SWS_FT_FI4

4) chain A
residue 224
type BINDING
sequence C
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00444
source Swiss-Prot : SWS_FT_FI4

5) chain A
residue 226
type BINDING
sequence C
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00444
source Swiss-Prot : SWS_FT_FI4

6) chain A
residue 111
type ACT_SITE
sequence C
description For PL-PRO activity => ECO:0000255|PROSITE-ProRule:PRU00444, ECO:0000269|PubMed:32726803
source Swiss-Prot : SWS_FT_FI2

7) chain A
residue 272
type ACT_SITE
sequence H
description For PL-PRO activity => ECO:0000255|PROSITE-ProRule:PRU00444
source Swiss-Prot : SWS_FT_FI3

8) chain A
residue 286
type ACT_SITE
sequence D
description For PL-PRO activity => ECO:0000255|PROSITE-ProRule:PRU00444
source Swiss-Prot : SWS_FT_FI3


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