eF-site ID 7kj2-A
PDB Code 7kj2
Chain A

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Title SARS-CoV-2 Spike Glycoprotein with one ACE2 Bound
Classification VIRAL PROTEIN/HYDROLASE
Compound Spike glycoprotein
Source (ACE2_HUMAN)
Sequence A:  AYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFH
AIHPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKSLLIV
NNATNVVIKVCEFQFCNDPFLGVCTFEYVSFKNLREFVFK
NIDGYFKIYSKHTPINLVRDLPQGFSALEPLVDLPIGINI
TRFQTLLAAYYVGYLQPRTFLLKYNENGTITDAVDCALDP
LSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNL
CPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFS
TFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQT
GKIADYNYKLPDDFTGCVIAWNSNNLDNYNYLYRLFRKSN
LKPFERDISTFPLQSYGFQPTNVGYQPYRVVVLSFELLHA
PATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFL
PFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITP
GTNTSNQVAVLYQDVNCTEVNVFQTRAGCLIGAEHVNNSY
ECDIPIGAGICASYQTQSIIAYTMSLGAENSVAYSNNSIA
IPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLL
LQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPP
IKDFGGFNFSQILPDPSKPSKRSFIEDLLFNKVTFNGLTV
LPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAM
QMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSS
TASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDI
LSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRA
SANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGV
VFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGT
HWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDP
LQPELDS
Description (1)  Spike glycoprotein


Functional site

1) chain A
residue 603
type CARBOHYD
sequence N
description N-linked (GlcNAc...) (hybrid) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04099, ECO:0000269|PubMed:32155444, ECO:0000269|PubMed:32366695, ECO:0000269|PubMed:32979942
source Swiss-Prot : SWS_FT_FI10

2) chain A
residue 676
type CARBOHYD
sequence T
description O-linked (GlcNAc...) threonine; by host GALNT1 => ECO:0000269|PubMed:34732583
source Swiss-Prot : SWS_FT_FI11

3) chain A
residue 1134
type CARBOHYD
sequence N
description N-linked (GlcNAc...) (complex) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04099, ECO:0000269|PubMed:32155444, ECO:0000269|PubMed:32366695, ECO:0000269|PubMed:32979942
source Swiss-Prot : SWS_FT_FI12

4) chain A
residue 801
type BINDING
sequence N
description BINDING => ECO:0000305|PubMed:14754895
source Swiss-Prot : SWS_FT_FI4

5) chain A
residue 1074
type BINDING
sequence N
description BINDING => ECO:0000305|PubMed:14754895
source Swiss-Prot : SWS_FT_FI4

6) chain A
residue 331
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000305|PubMed:14754895
source Swiss-Prot : SWS_FT_FI6

7) chain A
residue 343
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000305|PubMed:14754895
source Swiss-Prot : SWS_FT_FI6

8) chain A
residue 616
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000305|PubMed:14754895
source Swiss-Prot : SWS_FT_FI6

9) chain A
residue 657
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000305|PubMed:14754895
source Swiss-Prot : SWS_FT_FI6

10) chain A
residue 1098
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000305|PubMed:14754895
source Swiss-Prot : SWS_FT_FI6

11) chain A
residue 709
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:14754895, ECO:0000269|PubMed:15084671, ECO:0000269|PubMed:19901337
source Swiss-Prot : SWS_FT_FI7


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