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eF-site ID
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7k45-BHL |
PDB Code
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7k45 |
Chain
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B, H, L |
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click to enlarge
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Title
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SARS-CoV-2 spike in complex with the S2E12 neutralizing antibody Fab fragment (local refinement of the RBD and Fab variable domains) |
Classification
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VIRAL PROTEIN/IMMUNE SYSTEM |
Compound
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S2E12 neutralizing antibody Fab fragment (heavy chain) |
Source
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(SPIKE_SARS2) |
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Sequence
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B: |
NLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSAS
FSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG
QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLY
RLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQ
SYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGP
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H: |
VQLVQSGPEVKKPGTSVRVSCKASGFTFTSSAVQWVRQAR
GQRLEWVGWIVVGSGNTNYAQKFHERVTITRDMSTSTAYM
ELSSLRSEDTAVYYCASPYCSGGSCSDGFDIWGQGTMVTV
SS
|
L: |
IVLTQTPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKP
GQAPRLLIYGASSRATGIPDRFSGSTDFTLTISRLEPEDF
AVYYCQQYVGLTGWTFGQGTKVE
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Description
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Functional site
|
|
1)
|
chain |
B |
residue |
343 |
type |
CARBOHYD |
sequence |
N
|
description |
N-linked (GlcNAc...) (complex) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04099, ECO:0000269|PubMed:32155444, ECO:0000269|PubMed:32363391, ECO:0000269|PubMed:32366695, ECO:0000269|PubMed:32979942
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source |
Swiss-Prot : SWS_FT_FI6
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