eF-site ID 6w1u-C
PDB Code 6w1u
Chain C

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Title RT XFEL structure of Photosystem II 400 microseconds after the second illumination at 2.09 Angstrom resolution
Classification PHOTOSYNTHESIS
Compound Photosystem II protein D1 1
Source ORGANISM_SCIENTIFIC: Thermosynechococcus elongatus (strain BP-1);
Sequence C:  GFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMTLFE
LAHFIPEKPMYEQGLILIPHIATLGWGVGPGGEVVDTFPF
FVVGVVHLISSAVLGFGGVYHAIRGPETLEEYSSFFGYDW
KDKNKMTTILGFHLIVLGIGALLLVAKAMFFGGLYDTWAP
GGGDVRVITNPTLDPRVIFGYLLKSPFGGEGWIVSVNNLE
DVVGGHIWIGLICIAGGIWHILTTPFGWARRAFIWSGEAY
LSYSLGALSMMGFIATCFVWFNNTVYPSEFYGPTGPEASQ
AQAMTFLIRDQKLGANVGSAQGPTGLGKYLMRSPTGEIIF
GGETMRFWDFRGPWLEPLRGPNGLDLNKIKNDIQPWQERR
AAEYMTHAPLGSLNSVGGVATEINSVNFVSPRSWLATSHF
VLAFFFLVGHLWHAGRARAAAAGFEKGIDRESEPVLSMPS
LD
Description


Functional site

1) chain C
residue 353
type
sequence G
description binding site for residue CL A 408
source : AC8

2) chain C
residue 354
type
sequence E
description binding site for residue CL A 408
source : AC8

3) chain C
residue 214
type
sequence L
description binding site for residue LMG A 412
source : AD3

4) chain C
residue 215
type
sequence K
description binding site for residue LMG A 412
source : AD3

5) chain C
residue 216
type
sequence S
description binding site for residue LMG A 412
source : AD3

6) chain C
residue 221
type
sequence E
description binding site for residue LMG A 412
source : AD3

7) chain C
residue 223
type
sequence W
description binding site for residue LMG A 412
source : AD3

8) chain C
residue 281
type
sequence M
description binding site for residue LMG A 412
source : AD3

9) chain C
residue 34
type
sequence A
description binding site for residue SQD A 413
source : AD4

10) chain C
residue 36
type
sequence W
description binding site for residue SQD A 413
source : AD4

11) chain C
residue 354
type
sequence E
description binding site for residue OEX A 416
source : AD7

12) chain C
residue 357
type
sequence R
description binding site for residue OEX A 416
source : AD7

13) chain C
residue 354
type
sequence E
description binding site for residue OEY A 417
source : AD8

14) chain C
residue 357
type
sequence R
description binding site for residue OEY A 417
source : AD8

15) chain C
residue 181
type
sequence F
description binding site for residue CLA B 602
source : AE1

16) chain C
residue 253
type
sequence L
description binding site for residue STE B 627
source : AG8

17) chain C
residue 471
type
sequence S
description binding site for residue ASP C 473
source : AH2

18) chain C
residue 472
type
sequence L
description binding site for residue ASP C 473
source : AH2

19) chain C
residue 95
type
sequence L
description binding site for residue CLA C 502
source : AH3

20) chain C
residue 168
type
sequence L
description binding site for residue CLA C 502
source : AH3

21) chain C
residue 171
type
sequence G
description binding site for residue CLA C 502
source : AH3

22) chain C
residue 172
type
sequence A
description binding site for residue CLA C 502
source : AH3

23) chain C
residue 175
type
sequence L
description binding site for residue CLA C 502
source : AH3

24) chain C
residue 233
type
sequence V
description binding site for residue CLA C 502
source : AH3

25) chain C
residue 237
type
sequence H
description binding site for residue CLA C 502
source : AH3

26) chain C
residue 282
type
sequence M
description binding site for residue CLA C 502
source : AH3

27) chain C
residue 289
type
sequence F
description binding site for residue CLA C 502
source : AH3

28) chain C
residue 297
type
sequence Y
description binding site for residue CLA C 502
source : AH3

29) chain C
residue 91
type
sequence H
description binding site for residue CLA C 503
source : AH4

30) chain C
residue 174
type
sequence L
description binding site for residue CLA C 503
source : AH4

31) chain C
residue 279
type
sequence L
description binding site for residue CLA C 503
source : AH4

32) chain C
residue 282
type
sequence M
description binding site for residue CLA C 503
source : AH4

33) chain C
residue 286
type
sequence A
description binding site for residue CLA C 503
source : AH4

34) chain C
residue 297
type
sequence Y
description binding site for residue CLA C 503
source : AH4

35) chain C
residue 430
type
sequence H
description binding site for residue CLA C 503
source : AH4

36) chain C
residue 433
type
sequence L
description binding site for residue CLA C 503
source : AH4

37) chain C
residue 437
type
sequence F
description binding site for residue CLA C 503
source : AH4

38) chain C
residue 60
type
sequence I
description binding site for residue CLA C 504
source : AH5

39) chain C
residue 61
type
sequence V
description binding site for residue CLA C 504
source : AH5

40) chain C
residue 64
type
sequence A
description binding site for residue CLA C 504
source : AH5

41) chain C
residue 68
type
sequence T
description binding site for residue CLA C 504
source : AH5

42) chain C
residue 88
type
sequence L
description binding site for residue CLA C 504
source : AH5

43) chain C
residue 91
type
sequence H
description binding site for residue CLA C 504
source : AH5

44) chain C
residue 114
type
sequence V
description binding site for residue CLA C 504
source : AH5

45) chain C
residue 118
type
sequence H
description binding site for residue CLA C 504
source : AH5

46) chain C
residue 279
type
sequence L
description binding site for residue CLA C 504
source : AH5

47) chain C
residue 63
type
sequence W
description binding site for residue CLA C 505
source : AH6

48) chain C
residue 70
type
sequence F
description binding site for residue CLA C 505
source : AH6

49) chain C
residue 84
type
sequence Q
description binding site for residue CLA C 505
source : AH6

50) chain C
residue 85
type
sequence G
description binding site for residue CLA C 505
source : AH6

51) chain C
residue 425
type
sequence W
description binding site for residue CLA C 505
source : AH6

52) chain C
residue 429
type
sequence S
description binding site for residue CLA C 505
source : AH6

53) chain C
residue 264
type
sequence F
description binding site for residue CLA C 506
source : AH7

54) chain C
residue 274
type
sequence Y
description binding site for residue CLA C 506
source : AH7

55) chain C
residue 277
type
sequence G
description binding site for residue CLA C 506
source : AH7

56) chain C
residue 441
type
sequence H
description binding site for residue CLA C 506
source : AH7

57) chain C
residue 442
type
sequence L
description binding site for residue CLA C 506
source : AH7

58) chain C
residue 445
type
sequence A
description binding site for residue CLA C 506
source : AH7

59) chain C
residue 449
type
sequence R
description binding site for residue CLA C 506
source : AH7

60) chain C
residue 165
type
sequence L
description binding site for residue CLA C 507
source : AH8

61) chain C
residue 213
type
sequence L
description binding site for residue CLA C 507
source : AH8

62) chain C
residue 243
type
sequence I
description binding site for residue CLA C 507
source : AH8

63) chain C
residue 247
type
sequence G
description binding site for residue CLA C 507
source : AH8

64) chain C
residue 250
type
sequence W
description binding site for residue CLA C 507
source : AH8

65) chain C
residue 251
type
sequence H
description binding site for residue CLA C 507
source : AH8

66) chain C
residue 254
type
sequence T
description binding site for residue CLA C 507
source : AH8

67) chain C
residue 255
type
sequence T
description binding site for residue CLA C 507
source : AH8

68) chain C
residue 256
type
sequence P
description binding site for residue CLA C 507
source : AH8

69) chain C
residue 257
type
sequence F
description binding site for residue CLA C 507
source : AH8

70) chain C
residue 259
type
sequence W
description binding site for residue CLA C 507
source : AH8

71) chain C
residue 264
type
sequence F
description binding site for residue CLA C 507
source : AH8

72) chain C
residue 157
type
sequence M
description binding site for residue CLA C 508
source : AH9

73) chain C
residue 161
type
sequence L
description binding site for residue CLA C 508
source : AH9

74) chain C
residue 164
type
sequence H
description binding site for residue CLA C 508
source : AH9

75) chain C
residue 168
type
sequence L
description binding site for residue CLA C 508
source : AH9

76) chain C
residue 266
type
sequence W
description binding site for residue CLA C 508
source : AH9

77) chain C
residue 271
type
sequence Y
description binding site for residue CLA C 508
source : AH9

78) chain C
residue 274
type
sequence Y
description binding site for residue CLA C 508
source : AH9

79) chain C
residue 275
type
sequence S
description binding site for residue CLA C 508
source : AH9

80) chain C
residue 278
type
sequence A
description binding site for residue CLA C 508
source : AH9

81) chain C
residue 36
type
sequence W
description binding site for residue CLA C 509
source : AI1

82) chain C
residue 37
type
sequence A
description binding site for residue CLA C 509
source : AI1

83) chain C
residue 38
type
sequence G
description binding site for residue CLA C 509
source : AI1

84) chain C
residue 39
type
sequence N
description binding site for residue CLA C 509
source : AI1

85) chain C
residue 272
type
sequence L
description binding site for residue CLA C 509
source : AI1

86) chain C
residue 436
type
sequence F
description binding site for residue CLA C 509
source : AI1

87) chain C
residue 440
type
sequence G
description binding site for residue CLA C 509
source : AI1

88) chain C
residue 443
type
sequence W
description binding site for residue CLA C 509
source : AI1

89) chain C
residue 444
type
sequence H
description binding site for residue CLA C 509
source : AI1

90) chain C
residue 447
type
sequence R
description binding site for residue CLA C 509
source : AI1

91) chain C
residue 39
type
sequence N
description binding site for residue CLA C 510
source : AI2

92) chain C
residue 49
type
sequence L
description binding site for residue CLA C 510
source : AI2

93) chain C
residue 52
type
sequence A
description binding site for residue CLA C 510
source : AI2

94) chain C
residue 53
type
sequence H
description binding site for residue CLA C 510
source : AI2

95) chain C
residue 56
type
sequence H
description binding site for residue CLA C 510
source : AI2

96) chain C
residue 149
type
sequence Y
description binding site for residue CLA C 510
source : AI2

97) chain C
residue 268
type
sequence G
description binding site for residue CLA C 510
source : AI2

98) chain C
residue 269
type
sequence E
description binding site for residue CLA C 510
source : AI2

99) chain C
residue 271
type
sequence Y
description binding site for residue CLA C 510
source : AI2

100) chain C
residue 272
type
sequence L
description binding site for residue CLA C 510
source : AI2

101) chain C
residue 275
type
sequence S
description binding site for residue CLA C 510
source : AI2

102) chain C
residue 279
type
sequence L
description binding site for residue CLA C 510
source : AI2

103) chain C
residue 39
type
sequence N
description binding site for residue CLA C 511
source : AI3

104) chain C
residue 56
type
sequence H
description binding site for residue CLA C 511
source : AI3

105) chain C
residue 59
type
sequence L
description binding site for residue CLA C 511
source : AI3

106) chain C
residue 279
type
sequence L
description binding site for residue CLA C 511
source : AI3

107) chain C
residue 436
type
sequence F
description binding site for residue CLA C 511
source : AI3

108) chain C
residue 437
type
sequence F
description binding site for residue CLA C 511
source : AI3

109) chain C
residue 35
type
sequence W
description binding site for residue CLA C 512
source : AI4

110) chain C
residue 38
type
sequence G
description binding site for residue CLA C 512
source : AI4

111) chain C
residue 39
type
sequence N
description binding site for residue CLA C 512
source : AI4

112) chain C
residue 41
type
sequence R
description binding site for residue CLA C 512
source : AI4

113) chain C
residue 42
type
sequence L
description binding site for residue CLA C 512
source : AI4

114) chain C
residue 45
type
sequence L
description binding site for residue CLA C 512
source : AI4

115) chain C
residue 48
type
sequence K
description binding site for residue CLA C 512
source : AI4

116) chain C
residue 126
type
sequence G
description binding site for residue CLA C 512
source : AI4

117) chain C
residue 127
type
sequence F
description binding site for residue CLA C 512
source : AI4

118) chain C
residue 133
type
sequence A
description binding site for residue CLA C 512
source : AI4

119) chain C
residue 134
type
sequence I
description binding site for residue CLA C 512
source : AI4

120) chain C
residue 53
type
sequence H
description binding site for residue CLA C 513
source : AI5

121) chain C
residue 125
type
sequence L
description binding site for residue CLA C 513
source : AI5

122) chain C
residue 146
type
sequence F
description binding site for residue CLA C 513
source : AI5

123) chain C
residue 147
type
sequence F
description binding site for residue CLA C 513
source : AI5

124) chain C
residue 163
type
sequence F
description binding site for residue CLA C 513
source : AI5

125) chain C
residue 164
type
sequence H
description binding site for residue CLA C 513
source : AI5

126) chain C
residue 167
type
sequence V
description binding site for residue CLA C 513
source : AI5

127) chain C
residue 170
type
sequence I
description binding site for residue CLA C 513
source : AI5

128) chain C
residue 50
type
sequence L
description binding site for residue CLA C 514
source : AI6

129) chain C
residue 124
type
sequence V
description binding site for residue CLA C 514
source : AI6

130) chain C
residue 128
type
sequence G
description binding site for residue CLA C 514
source : AI6

131) chain C
residue 131
type
sequence Y
description binding site for residue CLA C 514
source : AI6

132) chain C
residue 132
type
sequence H
description binding site for residue CLA C 514
source : AI6

133) chain C
residue 137
type
sequence P
description binding site for residue CLA C 514
source : AI6

134) chain C
residue 140
type
sequence L
description binding site for residue CLA C 514
source : AI6

135) chain C
residue 143
type
sequence Y
description binding site for residue CLA C 514
source : AI6

136) chain C
residue 147
type
sequence F
description binding site for residue CLA C 514
source : AI6

137) chain C
residue 209
type
sequence I
description binding site for residue BCR C 515
source : AI7

138) chain C
residue 213
type
sequence L
description binding site for residue BCR C 515
source : AI7

139) chain C
residue 236
type
sequence G
description binding site for residue BCR C 515
source : AI7

140) chain C
residue 237
type
sequence H
description binding site for residue BCR C 515
source : AI7

141) chain C
residue 264
type
sequence F
description binding site for residue BCR C 515
source : AI7

142) chain C
residue 217
type
sequence P
description binding site for residue DGD C 516
source : AI8

143) chain C
residue 219
type
sequence G
description binding site for residue DGD C 516
source : AI8

144) chain C
residue 220
type
sequence G
description binding site for residue DGD C 516
source : AI8

145) chain C
residue 222
type
sequence G
description binding site for residue DGD C 516
source : AI8

146) chain C
residue 223
type
sequence W
description binding site for residue DGD C 516
source : AI8

147) chain C
residue 225
type
sequence V
description binding site for residue DGD C 516
source : AI8

148) chain C
residue 227
type
sequence V
description binding site for residue DGD C 516
source : AI8

149) chain C
residue 288
type
sequence C
description binding site for residue DGD C 516
source : AI8

150) chain C
residue 292
type
sequence F
description binding site for residue DGD C 516
source : AI8

151) chain C
residue 293
type
sequence N
description binding site for residue DGD C 516
source : AI8

152) chain C
residue 294
type
sequence N
description binding site for residue DGD C 516
source : AI8

153) chain C
residue 295
type
sequence T
description binding site for residue DGD C 516
source : AI8

154) chain C
residue 360
type
sequence D
description binding site for residue DGD C 516
source : AI8

155) chain C
residue 361
type
sequence F
description binding site for residue DGD C 516
source : AI8

156) chain C
residue 362
type
sequence R
description binding site for residue DGD C 516
source : AI8

157) chain C
residue 83
type
sequence E
description binding site for residue DGD C 517
source : AI9

158) chain C
residue 84
type
sequence Q
description binding site for residue DGD C 517
source : AI9

159) chain C
residue 85
type
sequence G
description binding site for residue DGD C 517
source : AI9

160) chain C
residue 406
type
sequence S
description binding site for residue DGD C 517
source : AI9

161) chain C
residue 418
type
sequence N
description binding site for residue DGD C 517
source : AI9

162) chain C
residue 419
type
sequence F
description binding site for residue DGD C 517
source : AI9

163) chain C
residue 420
type
sequence V
description binding site for residue DGD C 517
source : AI9

164) chain C
residue 425
type
sequence W
description binding site for residue DGD C 517
source : AI9

165) chain C
residue 405
type
sequence N
description binding site for residue DGD C 518
source : AJ1

166) chain C
residue 415
type
sequence N
description binding site for residue DGD C 518
source : AJ1

167) chain C
residue 416
type
sequence S
description binding site for residue DGD C 518
source : AJ1

168) chain C
residue 418
type
sequence N
description binding site for residue DGD C 518
source : AJ1

169) chain C
residue 74
type
sequence H
description binding site for residue LMG C 519
source : AJ2

170) chain C
residue 84
type
sequence Q
description binding site for residue LMG C 519
source : AJ2

171) chain C
residue 204
type
sequence L
description binding site for residue STE C 520
source : AJ3

172) chain C
residue 114
type
sequence V
description binding site for residue STE C 521
source : AJ4

173) chain C
residue 118
type
sequence H
description binding site for residue STE C 521
source : AJ4

174) chain C
residue 121
type
sequence S
description binding site for residue STE C 521
source : AJ4

175) chain C
residue 33
type
sequence F
description binding site for residue LHG D 409
source : AK5

176) chain C
residue 36
type
sequence W
description binding site for residue LHG D 409
source : AK5

177) chain C
residue 443
type
sequence W
description binding site for residue LHG D 409
source : AK5

178) chain C
residue 447
type
sequence R
description binding site for residue LHG D 409
source : AK5

179) chain C
residue 58
type
sequence G
description binding site for residue BCR K 101
source : AL8

180) chain C
residue 59
type
sequence L
description binding site for residue BCR K 101
source : AL8

181) chain C
residue 122
type
sequence S
description binding site for residue BCR K 101
source : AL8

182) chain C
residue 123
type
sequence A
description binding site for residue BCR K 101
source : AL8

183) chain C
residue 126
type
sequence G
description binding site for residue BCR K 101
source : AL8

184) chain C
residue 62
type
sequence F
description binding site for residue BCR Y 101
source : AM7

185) chain C
residue 120
type
sequence I
description binding site for residue BCR Z 101
source : AM8


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