eF-site ID 6w1r-z
PDB Code 6w1r
Chain z

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Title RT XFEL structure of Photosystem II 150 microseconds after the second illumination at 2.23 Angstrom resolution
Classification PHOTOSYNTHESIS
Compound Photosystem II protein D1 1
Source ORGANISM_SCIENTIFIC: Thermosynechococcus elongatus (strain BP-1);
Sequence z:  MTILFQLALAALVILSFVMVIGVPVAYASPQDWDRSKQLI
FLGSGLWIALVLVVGVLNFFVV
Description


Functional site

1) chain z
residue 20
type
sequence V
description binding site for residue CLA c 512
source : AT1

2) chain z
residue 58
type
sequence N
description binding site for residue BCR c 515
source : AT4

3) chain z
residue 17
type
sequence F
description binding site for residue BCR k 101
source : AW4

4) chain z
residue 16
type
sequence S
description binding site for residue BCR k 102
source : AW5

5) chain z
residue 1-4
type TOPO_DOM
sequence MTIL
description Lumenal
source Swiss-Prot : SWS_FT_FI1

6) chain z
residue 5-25
type TRANSMEM
sequence FQLALAALVILSFVMVIGVPV
description Helical => ECO:0000269|PubMed:33846594, ECO:0007744|PDB:7NHQ
source Swiss-Prot : SWS_FT_FI2

7) chain z
residue 37-58
type TRANSMEM
sequence KQLIFLGSGLWIALVLVVGVLN
description Helical => ECO:0000269|PubMed:33846594, ECO:0007744|PDB:7NHQ
source Swiss-Prot : SWS_FT_FI2

8) chain z
residue 26-36
type TOPO_DOM
sequence AYASPQDWDRS
description Cytoplasmic => ECO:0000269|PubMed:33846594, ECO:0007744|PDB:7NHQ
source Swiss-Prot : SWS_FT_FI3

9) chain z
residue 59-62
type TOPO_DOM
sequence FFVV
description Lumenal => ECO:0000269|PubMed:33846594, ECO:0007744|PDB:7NHQ
source Swiss-Prot : SWS_FT_FI4

10) chain z
residue 1
type MOD_RES
sequence M
description N-formylmethionine => ECO:0000269|PubMed:19219048, ECO:0000269|PubMed:20558739
source Swiss-Prot : SWS_FT_FI5


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