eF-site ID 6w1r-b
PDB Code 6w1r
Chain b

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Title RT XFEL structure of Photosystem II 150 microseconds after the second illumination at 2.23 Angstrom resolution
Classification PHOTOSYNTHESIS
Compound Photosystem II protein D1 1
Source ORGANISM_SCIENTIFIC: Thermosynechococcus elongatus (strain BP-1);
Sequence b:  GLPWYRVHTVLINDPGRLIAAHLMHTALVAGWAGSMALYE
LATFDPSDPVLNPMWRQGMFVLPFMARLGVTGSWSGWSIT
GETGIDPGFWSFEGVALAHIVLSGLLFLAACWHWVYWDLE
LFRDPRTGEPALDLPKMFGIHLFLAGLLCFGFGAFHLTGL
FGPGMWVSDPYGLTGSVQPVAPEWGPDGFNPYNPGGVVAH
HIAAGIVGIIAGLFHILVRPPQRLYKALRMGNIETVLSSS
IAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDSSYFQ
QEINRRVQASLASGATLEEAWSAIPEKLAFYDYIGNNPAK
GGLFRTGPMNKGDGIAQAWKGHAVFRNKEGEELFVRRMPA
FFESFPVILTDKNGVVKADIPFRRAESKYSFEQQGVTVSF
YGGELNGQTFTDPPTVKSYARKAIFGEIFEFDTETLNSDG
IFRTSPRGWFTFAHAVFALLFFFGHIWHGARTLFRDVFSG
IDPELSPEQVEWGFYQKVGDVTTRR
Description


Functional site

1) chain b
residue 75
type
sequence W
description binding site for residue DGD A 414
source : AD5

2) chain b
residue 76
type
sequence S
description binding site for residue DGD A 414
source : AD5

3) chain b
residue 18
type
sequence R
description binding site for residue SQD L 101
source : AL5

4) chain b
residue 28
type
sequence A
description binding site for residue SQD L 101
source : AL5

5) chain b
residue 29
type
sequence L
description binding site for residue SQD L 101
source : AL5

6) chain b
residue 104
type
sequence S
description binding site for residue SQD L 101
source : AL5

7) chain b
residue 115
type
sequence W
description binding site for residue SQD L 101
source : AL5

8) chain b
residue 37
type
sequence M
description binding site for residue BCR T 101
source : AM3

9) chain b
residue 43
type
sequence A
description binding site for residue STE T 102
source : AM4

10) chain b
residue 6
type
sequence Y
description binding site for residue LHG a 412
source : AO3

11) chain b
residue 7
type
sequence R
description binding site for residue LHG a 412
source : AO3

12) chain b
residue 468
type
sequence W
description binding site for residue LHG a 412
source : AO3

13) chain b
residue 185
type
sequence W
description binding site for residue CLA b 601
source : AP2

14) chain b
residue 187
type
sequence P
description binding site for residue CLA b 601
source : AP2

15) chain b
residue 190
type
sequence F
description binding site for residue CLA b 601
source : AP2

16) chain b
residue 189
type
sequence G
description binding site for residue CLA b 602
source : AP3

17) chain b
residue 190
type
sequence F
description binding site for residue CLA b 602
source : AP3

18) chain b
residue 192
type
sequence P
description binding site for residue CLA b 602
source : AP3

19) chain b
residue 197
type
sequence G
description binding site for residue CLA b 602
source : AP3

20) chain b
residue 201
type
sequence H
description binding site for residue CLA b 602
source : AP3

21) chain b
residue 208
type
sequence V
description binding site for residue CLA b 602
source : AP3

22) chain b
residue 247
type
sequence F
description binding site for residue CLA b 602
source : AP3

23) chain b
residue 251
type
sequence V
description binding site for residue CLA b 602
source : AP3

24) chain b
residue 68
type
sequence R
description binding site for residue CLA b 603
source : AP4

25) chain b
residue 69
type
sequence L
description binding site for residue CLA b 603
source : AP4

26) chain b
residue 146
type
sequence A
description binding site for residue CLA b 603
source : AP4

27) chain b
residue 150
type
sequence C
description binding site for residue CLA b 603
source : AP4

28) chain b
residue 153
type
sequence F
description binding site for residue CLA b 603
source : AP4

29) chain b
residue 201
type
sequence H
description binding site for residue CLA b 603
source : AP4

30) chain b
residue 202
type
sequence H
description binding site for residue CLA b 603
source : AP4

31) chain b
residue 248
type
sequence A
description binding site for residue CLA b 603
source : AP4

32) chain b
residue 252
type
sequence V
description binding site for residue CLA b 603
source : AP4

33) chain b
residue 262
type
sequence T
description binding site for residue CLA b 603
source : AP4

34) chain b
residue 33
type
sequence W
description binding site for residue CLA b 604
source : AP5

35) chain b
residue 61
type
sequence F
description binding site for residue CLA b 604
source : AP5

36) chain b
residue 65
type
sequence F
description binding site for residue CLA b 604
source : AP5

37) chain b
residue 68
type
sequence R
description binding site for residue CLA b 604
source : AP5

38) chain b
residue 145
type
sequence L
description binding site for residue CLA b 604
source : AP5

39) chain b
residue 148
type
sequence L
description binding site for residue CLA b 604
source : AP5

40) chain b
residue 149
type
sequence L
description binding site for residue CLA b 604
source : AP5

41) chain b
residue 245
type
sequence V
description binding site for residue CLA b 604
source : AP5

42) chain b
residue 248
type
sequence A
description binding site for residue CLA b 604
source : AP5

43) chain b
residue 249
type
sequence A
description binding site for residue CLA b 604
source : AP5

44) chain b
residue 252
type
sequence V
description binding site for residue CLA b 604
source : AP5

45) chain b
residue 451
type
sequence F
description binding site for residue CLA b 604
source : AP5

46) chain b
residue 455
type
sequence H
description binding site for residue CLA b 604
source : AP5

47) chain b
residue 27
type
sequence T
description binding site for residue CLA b 605
source : AP6

48) chain b
residue 30
type
sequence V
description binding site for residue CLA b 605
source : AP6

49) chain b
residue 31
type
sequence A
description binding site for residue CLA b 605
source : AP6

50) chain b
residue 34
type
sequence A
description binding site for residue CLA b 605
source : AP6

51) chain b
residue 62
type
sequence V
description binding site for residue CLA b 605
source : AP6

52) chain b
residue 66
type
sequence M
description binding site for residue CLA b 605
source : AP6

53) chain b
residue 100
type
sequence H
description binding site for residue CLA b 605
source : AP6

54) chain b
residue 205
type
sequence A
description binding site for residue CLA b 605
source : AP6

55) chain b
residue 209
type
sequence G
description binding site for residue CLA b 605
source : AP6

56) chain b
residue 69
type
sequence L
description binding site for residue CLA b 606
source : AP7

57) chain b
residue 70
type
sequence G
description binding site for residue CLA b 606
source : AP7

58) chain b
residue 90
type
sequence F
description binding site for residue CLA b 606
source : AP7

59) chain b
residue 91
type
sequence W
description binding site for residue CLA b 606
source : AP7

60) chain b
residue 98
type
sequence L
description binding site for residue CLA b 606
source : AP7

61) chain b
residue 99
type
sequence A
description binding site for residue CLA b 606
source : AP7

62) chain b
residue 100
type
sequence H
description binding site for residue CLA b 606
source : AP7

63) chain b
residue 102
type
sequence V
description binding site for residue CLA b 606
source : AP7

64) chain b
residue 103
type
sequence L
description binding site for residue CLA b 606
source : AP7

65) chain b
residue 152
type
sequence G
description binding site for residue CLA b 606
source : AP7

66) chain b
residue 153
type
sequence F
description binding site for residue CLA b 606
source : AP7

67) chain b
residue 156
type
sequence F
description binding site for residue CLA b 606
source : AP7

68) chain b
residue 157
type
sequence H
description binding site for residue CLA b 606
source : AP7

69) chain b
residue 162
type
sequence F
description binding site for residue CLA b 606
source : AP7

70) chain b
residue 164
type
sequence P
description binding site for residue CLA b 606
source : AP7

71) chain b
residue 33
type
sequence W
description binding site for residue CLA b 607
source : AP8

72) chain b
residue 40
type
sequence Y
description binding site for residue CLA b 607
source : AP8

73) chain b
residue 58
type
sequence Q
description binding site for residue CLA b 607
source : AP8

74) chain b
residue 59
type
sequence G
description binding site for residue CLA b 607
source : AP8

75) chain b
residue 61
type
sequence F
description binding site for residue CLA b 607
source : AP8

76) chain b
residue 324
type
sequence L
description binding site for residue CLA b 607
source : AP8

77) chain b
residue 327
type
sequence T
description binding site for residue CLA b 607
source : AP8

78) chain b
residue 328
type
sequence G
description binding site for residue CLA b 607
source : AP8

79) chain b
residue 329
type
sequence P
description binding site for residue CLA b 607
source : AP8

80) chain b
residue 450
type
sequence W
description binding site for residue CLA b 607
source : AP8

81) chain b
residue 451
type
sequence F
description binding site for residue CLA b 607
source : AP8

82) chain b
residue 229
type
sequence L
description binding site for residue CLA b 608
source : AP9

83) chain b
residue 236
type
sequence T
description binding site for residue CLA b 608
source : AP9

84) chain b
residue 239
type
sequence S
description binding site for residue CLA b 608
source : AP9

85) chain b
residue 240
type
sequence S
description binding site for residue CLA b 608
source : AP9

86) chain b
residue 243
type
sequence A
description binding site for residue CLA b 608
source : AP9

87) chain b
residue 246
type
sequence F
description binding site for residue CLA b 608
source : AP9

88) chain b
residue 466
type
sequence H
description binding site for residue CLA b 608
source : AP9

89) chain b
residue 467
type
sequence I
description binding site for residue CLA b 608
source : AP9

90) chain b
residue 139
type
sequence F
description binding site for residue CLA b 609
source : AQ1

91) chain b
residue 212
type
sequence A
description binding site for residue CLA b 609
source : AQ1

92) chain b
residue 215
type
sequence F
description binding site for residue CLA b 609
source : AQ1

93) chain b
residue 216
type
sequence H
description binding site for residue CLA b 609
source : AQ1

94) chain b
residue 219
type
sequence V
description binding site for residue CLA b 609
source : AQ1

95) chain b
residue 221
type
sequence P
description binding site for residue CLA b 609
source : AQ1

96) chain b
residue 222
type
sequence P
description binding site for residue CLA b 609
source : AQ1

97) chain b
residue 225
type
sequence L
description binding site for residue CLA b 609
source : AQ1

98) chain b
residue 229
type
sequence L
description binding site for residue CLA b 609
source : AQ1

99) chain b
residue 135
type
sequence L
description binding site for residue CLA b 610
source : AQ2

100) chain b
residue 139
type
sequence F
description binding site for residue CLA b 610
source : AQ2

101) chain b
residue 142
type
sequence H
description binding site for residue CLA b 610
source : AQ2

102) chain b
residue 143
type
sequence L
description binding site for residue CLA b 610
source : AQ2

103) chain b
residue 146
type
sequence A
description binding site for residue CLA b 610
source : AQ2

104) chain b
residue 231
type
sequence M
description binding site for residue CLA b 610
source : AQ2

105) chain b
residue 236
type
sequence T
description binding site for residue CLA b 610
source : AQ2

106) chain b
residue 237
type
sequence V
description binding site for residue CLA b 610
source : AQ2

107) chain b
residue 240
type
sequence S
description binding site for residue CLA b 610
source : AQ2

108) chain b
residue 241
type
sequence S
description binding site for residue CLA b 610
source : AQ2

109) chain b
residue 5
type
sequence W
description binding site for residue CLA b 611
source : AQ3

110) chain b
residue 6
type
sequence Y
description binding site for residue CLA b 611
source : AQ3

111) chain b
residue 7
type
sequence R
description binding site for residue CLA b 611
source : AQ3

112) chain b
residue 8
type
sequence V
description binding site for residue CLA b 611
source : AQ3

113) chain b
residue 9
type
sequence H
description binding site for residue CLA b 611
source : AQ3

114) chain b
residue 461
type
sequence L
description binding site for residue CLA b 611
source : AQ3

115) chain b
residue 462
type
sequence F
description binding site for residue CLA b 611
source : AQ3

116) chain b
residue 465
type
sequence G
description binding site for residue CLA b 611
source : AQ3

117) chain b
residue 468
type
sequence W
description binding site for residue CLA b 611
source : AQ3

118) chain b
residue 469
type
sequence H
description binding site for residue CLA b 611
source : AQ3

119) chain b
residue 472
type
sequence R
description binding site for residue CLA b 611
source : AQ3

120) chain b
residue 9
type
sequence H
description binding site for residue CLA b 612
source : AQ4

121) chain b
residue 12
type
sequence L
description binding site for residue CLA b 612
source : AQ4

122) chain b
residue 19
type
sequence L
description binding site for residue CLA b 612
source : AQ4

123) chain b
residue 23
type
sequence H
description binding site for residue CLA b 612
source : AQ4

124) chain b
residue 26
type
sequence H
description binding site for residue CLA b 612
source : AQ4

125) chain b
residue 27
type
sequence T
description binding site for residue CLA b 612
source : AQ4

126) chain b
residue 237
type
sequence V
description binding site for residue CLA b 612
source : AQ4

127) chain b
residue 238
type
sequence L
description binding site for residue CLA b 612
source : AQ4

128) chain b
residue 241
type
sequence S
description binding site for residue CLA b 612
source : AQ4

129) chain b
residue 9
type
sequence H
description binding site for residue CLA b 613
source : AQ5

130) chain b
residue 26
type
sequence H
description binding site for residue CLA b 613
source : AQ5

131) chain b
residue 462
type
sequence F
description binding site for residue CLA b 613
source : AQ5

132) chain b
residue 8
type
sequence V
description binding site for residue CLA b 614
source : AQ6

133) chain b
residue 9
type
sequence H
description binding site for residue CLA b 614
source : AQ6

134) chain b
residue 11
type
sequence V
description binding site for residue CLA b 614
source : AQ6

135) chain b
residue 29
type
sequence L
description binding site for residue CLA b 614
source : AQ6

136) chain b
residue 23
type
sequence H
description binding site for residue CLA b 615
source : AQ7

137) chain b
residue 24
type
sequence L
description binding site for residue CLA b 615
source : AQ7

138) chain b
residue 142
type
sequence H
description binding site for residue CLA b 615
source : AQ7

139) chain b
residue 145
type
sequence L
description binding site for residue CLA b 615
source : AQ7

140) chain b
residue 24
type
sequence L
description binding site for residue CLA b 616
source : AQ8

141) chain b
residue 110
type
sequence A
description binding site for residue CLA b 616
source : AQ8

142) chain b
residue 113
type
sequence W
description binding site for residue CLA b 616
source : AQ8

143) chain b
residue 114
type
sequence H
description binding site for residue CLA b 616
source : AQ8

144) chain b
residue 25
type
sequence M
description binding site for residue BCR b 617
source : AQ9

145) chain b
residue 115
type
sequence W
description binding site for residue BCR b 617
source : AQ9

146) chain b
residue 29
type
sequence L
description binding site for residue BCR b 618
source : AR1

147) chain b
residue 32
type
sequence G
description binding site for residue BCR b 618
source : AR1

148) chain b
residue 36
type
sequence S
description binding site for residue BCR b 618
source : AR1

149) chain b
residue 101
type
sequence I
description binding site for residue BCR b 618
source : AR1

150) chain b
residue 102
type
sequence V
description binding site for residue BCR b 618
source : AR1

151) chain b
residue 105
type
sequence G
description binding site for residue BCR b 618
source : AR1

152) chain b
residue 109
type
sequence L
description binding site for residue BCR b 619
source : AR2

153) chain b
residue 117
type
sequence Y
description binding site for residue BCR b 619
source : AR2

154) chain b
residue 90
type
sequence F
description binding site for residue STE b 620
source : AR3

155) chain b
residue 91
type
sequence W
description binding site for residue STE b 620
source : AR3

156) chain b
residue 151
type
sequence F
description binding site for residue LMG b 621
source : AR4

157) chain b
residue 155
type
sequence A
description binding site for residue LMG b 621
source : AR4

158) chain b
residue 159
type
sequence T
description binding site for residue LMG b 621
source : AR4

159) chain b
residue 161
type
sequence L
description binding site for residue LMG b 621
source : AR4

160) chain b
residue 182
type
sequence A
description binding site for residue LMG b 621
source : AR4

161) chain b
residue 185
type
sequence W
description binding site for residue LMG b 621
source : AR4

162) chain b
residue 203
type
sequence I
description binding site for residue LMG b 621
source : AR4

163) chain b
residue 228
type
sequence A
description binding site for residue STE b 622
source : AR5

164) chain b
residue 43
type
sequence A
description binding site for residue STE b 623
source : AR6

165) chain b
residue 218
type
sequence L
description binding site for residue STE b 624
source : AR7

166) chain b
residue 184
type
sequence E
description binding site for residue LMG c 522
source : AU2

167) chain b
residue 185
type
sequence W
description binding site for residue LMG c 522
source : AU2

168) chain b
residue 224
type
sequence R
description binding site for residue STE d 412
source : AV6

169) chain b
residue 227
type
sequence K
description binding site for residue STE d 412
source : AV6

170) chain b
residue 193
type
sequence Y
description binding site for residue DGD h 102
source : AW1

171) chain b
residue 258
type
sequence Y
description binding site for residue DGD h 102
source : AW1

172) chain b
residue 273
type
sequence Y
description binding site for residue DGD h 102
source : AW1

173) chain b
residue 274
type
sequence Q
description binding site for residue DGD h 102
source : AW1

174) chain b
residue 277
type
sequence S
description binding site for residue DGD h 102
source : AW1

175) chain b
residue 279
type
sequence Y
description binding site for residue DGD h 102
source : AW1

176) chain b
residue 4
type
sequence P
description binding site for residue LHG l 101
source : AW6

177) chain b
residue 5
type
sequence W
description binding site for residue LHG l 101
source : AW6

178) chain b
residue 6
type
sequence Y
description binding site for residue LHG l 101
source : AW6

179) chain b
residue 327
type
sequence T
description binding site for residue LMG m 101
source : AW7

180) chain b
residue 329
type
sequence P
description binding site for residue LMG m 101
source : AW7

181) chain b
residue 332
type
sequence K
description binding site for residue LMG m 101
source : AW7


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